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The map label for this gene is insF1 [C]

Identifier: 138894431

GI number: 138894431

Start: 828428

End: 828997

Strand: Direct

Name: insF1 [C]

Synonym: GTNG_0759

Alternate gene names: 138894431

Gene position: 828428-828997 (Clockwise)

Preceding gene: 138894430

Following gene: 138894432

Centisome position: 23.33

GC content: 42.28

Gene sequence:

>570_bases
ATGTGTCAAGTGCTCGGTGTTTCAAGAAGTGGGTATTACGATTGGCTCAAGCGCGCGAAAAGTAAACAGAAAGAACGAAA
AGAACAACTAACTCAACAGATTCGAAATGAGTATCTAAAGTCCCGTAAGATTTACGGAAGCCCAAAAATTACGCAAGAAC
TACACAAACAAGGGATTCGTGTGTCTCAAAAGACGGTCGCTCGCATCATGAGCGAAGAAGGATTGAGATTCATTACCGTC
CGTAAATTCAAAGCCACTACGAACAGCAACCATCCTTACAACGTATATGACAATCTATTGAAACAAAACTTCCAAGCAAC
AGCTCCGAATGAAGTATGGATGGCGGATATTACGTACATTCCTACCGACGAAGGTTGGTTGTATTTAGCGAGCATCATGG
ATTTATATACTCGCAAGATTGTAGGATGGTATATCGATACACGAATGACGAAAGAGTTAGTCATCAAAGCGTTACAACGA
GCGTTAAACAACGAGAAACCAACAGGGAGAGTCCTTCATCACTCGGATCGTGGGAGCCAATATGCTTCGAATGACTATCA
ACAGCTCTGA

Upstream 100 bases:

>100_bases
AATTAGCGATCCTAAAAAAGGCGCTAGGCATCTTCACCAGAAACCAGAAGTAATTTACGCGTTCATTTTTCAACACCGAA
ACGAATTTCGCGTGGTGAAG

Downstream 100 bases:

>100_bases
CAGGAACATCATTTTCAAGTGAGCATGTCGAGACGTGGAAACTGTTACGACAACGCTTGTATCGAGTCATTTCATAGCCT
CATCAAGAAAGAGTGTATTT

Product: putative transposase

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MCQVLGVSRSGYYDWLKRAKSKQKERKEQLTQQIRNEYLKSRKIYGSPKITQELHKQGIRVSQKTVARIMSEEGLRFITV
RKFKATTNSNHPYNVYDNLLKQNFQATAPNEVWMADITYIPTDEGWLYLASIMDLYTRKIVGWYIDTRMTKELVIKALQR
ALNNEKPTGRVLHHSDRGSQYASNDYQQL

Sequences:

>Translated_189_residues
MCQVLGVSRSGYYDWLKRAKSKQKERKEQLTQQIRNEYLKSRKIYGSPKITQELHKQGIRVSQKTVARIMSEEGLRFITV
RKFKATTNSNHPYNVYDNLLKQNFQATAPNEVWMADITYIPTDEGWLYLASIMDLYTRKIVGWYIDTRMTKELVIKALQR
ALNNEKPTGRVLHHSDRGSQYASNDYQQL
>Mature_189_residues
MCQVLGVSRSGYYDWLKRAKSKQKERKEQLTQQIRNEYLKSRKIYGSPKITQELHKQGIRVSQKTVARIMSEEGLRFITV
RKFKATTNSNHPYNVYDNLLKQNFQATAPNEVWMADITYIPTDEGWLYLASIMDLYTRKIVGWYIDTRMTKELVIKALQR
ALNNEKPTGRVLHHSDRGSQYASNDYQQL

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=191, Percent_Identity=36.6492146596859, Blast_Score=134, Evalue=5e-32,
Organism=Escherichia coli, GI1788405, Length=189, Percent_Identity=42.8571428571429, Blast_Score=167, Evalue=4e-43,
Organism=Escherichia coli, GI1787263, Length=189, Percent_Identity=42.8571428571429, Blast_Score=167, Evalue=4e-43,
Organism=Escherichia coli, GI1786753, Length=189, Percent_Identity=42.8571428571429, Blast_Score=167, Evalue=4e-43,
Organism=Escherichia coli, GI1786570, Length=189, Percent_Identity=42.8571428571429, Blast_Score=167, Evalue=4e-43,
Organism=Escherichia coli, GI1786490, Length=189, Percent_Identity=42.8571428571429, Blast_Score=167, Evalue=4e-43,
Organism=Escherichia coli, GI1789981, Length=187, Percent_Identity=27.807486631016, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 22212; Mature: 22212

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQVLGVSRSGYYDWLKRAKSKQKERKEQLTQQIRNEYLKSRKIYGSPKITQELHKQGIR
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
VSQKTVARIMSEEGLRFITVRKFKATTNSNHPYNVYDNLLKQNFQATAPNEVWMADITYI
HHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEE
PTDEGWLYLASIMDLYTRKIVGWYIDTRMTKELVIKALQRALNNEKPTGRVLHHSDRGSQ
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC
YASNDYQQL
CCCCHHHCC
>Mature Secondary Structure
MCQVLGVSRSGYYDWLKRAKSKQKERKEQLTQQIRNEYLKSRKIYGSPKITQELHKQGIR
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
VSQKTVARIMSEEGLRFITVRKFKATTNSNHPYNVYDNLLKQNFQATAPNEVWMADITYI
HHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEE
PTDEGWLYLASIMDLYTRKIVGWYIDTRMTKELVIKALQRALNNEKPTGRVLHHSDRGSQ
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC
YASNDYQQL
CCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]