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The map label for this gene is insF1 [C]

Identifier: 138894428

GI number: 138894428

Start: 824496

End: 825326

Strand: Reverse

Name: insF1 [C]

Synonym: GTNG_0756

Alternate gene names: 138894428

Gene position: 825326-824496 (Counterclockwise)

Preceding gene: 138894436

Following gene: 138894427

Centisome position: 23.25

GC content: 41.16

Gene sequence:

>831_bases
ATGTGCCAAGTTCTCGGTGTTTCTAAAAGTGGGTATTATGCATGGCTGAAACGACCAAAAAGCAACCAAAAAGAGAAAAA
AGAACAACTGACCCAACAGATTCGAAATGAGTATCTCAAGTCACGCAAGATTTACGGTAGTCCGAAAATTACGCAAGAAC
TACGCAAACAAGGAATTGGTGTGTCCCAAAAGACAGTCGCTCGCATCATGAGTGAAGAAGGATTAAGATCCATTACGGTA
CGTAAATACAAGGCAACGACGAATAGTAATCATCCTTACAACGTGTATGTGAATCTGTTAGAACAGAACTTCCAAGCAAC
GGCTCCAAATGAAGTATGGATGGCCGATATCACGTACATTCCTACTGATGAAGGATGGTTGTATTTAGCGAGCATCATGG
ATTTATATACCCGTAAAATCGTAGGATGGTATATCGATAACCAAATGACGAAAGAGTTAGTCATTAAAGCCTTACAACGA
GCGTTAAACAACGAGAAACCAACAGGGAGAGTCCTCCATCACTCGGATCGTGGGAGCCAATATGCTTCAAATGACTATCA
GCAGCTCTTACAGGAACACCATTTTCAAGTGAGCATGTCGAGACGTGGGAACTGTTACGATAACGCTTGTATCGAGTCGT
TTCATAGCTTAATCAAGAAAGAATGTATCTATCCGAATCGATTCCGTACGCGAAAAGAAGCGAAACAAGCCATTTTTGAG
TACATCGAATGTTTCTACAACCGTAAGAGAAGTCATTCCGCTCTTGAATATGTATCGCCATGTGAATTTGAAGCTGCTTA
CTACGCTAATCAGAGAAAGGTAGCTGTATAA

Upstream 100 bases:

>100_bases
AATTAGCGATCCTAAAAAAGGCGTTAGGCATCTTCACCAGAAACCAGAAGTGATTTACGCGTTCATTTTTCAACATCGAA
ATGAATTTCGCGTGGTGAAG

Downstream 100 bases:

>100_bases
ATTCAGCTATTTCTCTCTGTTTAACGTGTCCGTTTTCTTGACATAACACCACATCTATACGAAAAATAGATGCATATGCC
TAATTGTCAAACTGTACATT

Product: putative transposase

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MCQVLGVSKSGYYAWLKRPKSNQKEKKEQLTQQIRNEYLKSRKIYGSPKITQELRKQGIGVSQKTVARIMSEEGLRSITV
RKYKATTNSNHPYNVYVNLLEQNFQATAPNEVWMADITYIPTDEGWLYLASIMDLYTRKIVGWYIDNQMTKELVIKALQR
ALNNEKPTGRVLHHSDRGSQYASNDYQQLLQEHHFQVSMSRRGNCYDNACIESFHSLIKKECIYPNRFRTRKEAKQAIFE
YIECFYNRKRSHSALEYVSPCEFEAAYYANQRKVAV

Sequences:

>Translated_276_residues
MCQVLGVSKSGYYAWLKRPKSNQKEKKEQLTQQIRNEYLKSRKIYGSPKITQELRKQGIGVSQKTVARIMSEEGLRSITV
RKYKATTNSNHPYNVYVNLLEQNFQATAPNEVWMADITYIPTDEGWLYLASIMDLYTRKIVGWYIDNQMTKELVIKALQR
ALNNEKPTGRVLHHSDRGSQYASNDYQQLLQEHHFQVSMSRRGNCYDNACIESFHSLIKKECIYPNRFRTRKEAKQAIFE
YIECFYNRKRSHSALEYVSPCEFEAAYYANQRKVAV
>Mature_276_residues
MCQVLGVSKSGYYAWLKRPKSNQKEKKEQLTQQIRNEYLKSRKIYGSPKITQELRKQGIGVSQKTVARIMSEEGLRSITV
RKYKATTNSNHPYNVYVNLLEQNFQATAPNEVWMADITYIPTDEGWLYLASIMDLYTRKIVGWYIDNQMTKELVIKALQR
ALNNEKPTGRVLHHSDRGSQYASNDYQQLLQEHHFQVSMSRRGNCYDNACIESFHSLIKKECIYPNRFRTRKEAKQAIFE
YIECFYNRKRSHSALEYVSPCEFEAAYYANQRKVAV

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=250, Percent_Identity=33.2, Blast_Score=151, Evalue=6e-37,
Organism=Escherichia coli, GI1788405, Length=266, Percent_Identity=43.609022556391, Blast_Score=239, Evalue=1e-64,
Organism=Escherichia coli, GI1787263, Length=266, Percent_Identity=43.609022556391, Blast_Score=239, Evalue=1e-64,
Organism=Escherichia coli, GI1786753, Length=266, Percent_Identity=43.609022556391, Blast_Score=239, Evalue=1e-64,
Organism=Escherichia coli, GI1786570, Length=266, Percent_Identity=43.609022556391, Blast_Score=239, Evalue=1e-64,
Organism=Escherichia coli, GI1786490, Length=266, Percent_Identity=43.609022556391, Blast_Score=239, Evalue=1e-64,
Organism=Escherichia coli, GI1789981, Length=266, Percent_Identity=31.9548872180451, Blast_Score=145, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32401; Mature: 32401

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQVLGVSKSGYYAWLKRPKSNQKEKKEQLTQQIRNEYLKSRKIYGSPKITQELRKQGIG
CCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
VSQKTVARIMSEEGLRSITVRKYKATTNSNHPYNVYVNLLEQNFQATAPNEVWMADITYI
CCHHHHHHHHHHCCHHHHHHEEEECCCCCCCCEEEEHHHHHHCCCCCCCCCEEEEEEEEE
PTDEGWLYLASIMDLYTRKIVGWYIDNQMTKELVIKALQRALNNEKPTGRVLHHSDRGSQ
ECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC
YASNDYQQLLQEHHFQVSMSRRGNCYDNACIESFHSLIKKECIYPNRFRTRKEAKQAIFE
CCCHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
YIECFYNRKRSHSALEYVSPCEFEAAYYANQRKVAV
HHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MCQVLGVSKSGYYAWLKRPKSNQKEKKEQLTQQIRNEYLKSRKIYGSPKITQELRKQGIG
CCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
VSQKTVARIMSEEGLRSITVRKYKATTNSNHPYNVYVNLLEQNFQATAPNEVWMADITYI
CCHHHHHHHHHHCCHHHHHHEEEECCCCCCCCEEEEHHHHHHCCCCCCCCCEEEEEEEEE
PTDEGWLYLASIMDLYTRKIVGWYIDNQMTKELVIKALQRALNNEKPTGRVLHHSDRGSQ
ECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC
YASNDYQQLLQEHHFQVSMSRRGNCYDNACIESFHSLIKKECIYPNRFRTRKEAKQAIFE
CCCHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
YIECFYNRKRSHSALEYVSPCEFEAAYYANQRKVAV
HHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]