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The map label for this gene is ydbP [H]

Identifier: 138894411

GI number: 138894411

Start: 809901

End: 810236

Strand: Reverse

Name: ydbP [H]

Synonym: GTNG_0739

Alternate gene names: 138894411

Gene position: 810236-809901 (Counterclockwise)

Preceding gene: 138894414

Following gene: 138894410

Centisome position: 22.82

GC content: 48.51

Gene sequence:

>336_bases
ATGGAGGGAACACGCATGAAAGCCATTGAAACGAACGATCAGTTCACAGCGGCTATTTCTGGCAGCAAACCAGCTGTCAT
CAAATTTTACACCACTTGGTGCCCTGATTGTGTACGCTTGAACATGTTCATCGATGACATCATTCGTGATTACGATCAAT
ATGATTGGTTTGAGATTAACCGCGACCAATTCCCGGAGCTTGGCGAGAAATATCAAGTGCTCGGCATCCCGAGCTTGCTT
GTGTTCCAAAACGGGGAAAAAATCGCCCATCTGCATAGCGCCAACGCGAAAACCCCCGAAGAGGTGCGCGCCTTTTTGCA
ATCATTGCCCGCTTGA

Upstream 100 bases:

>100_bases
CCCTTTCTTTCTGTTGTATGCAAGACGGGGGGCCGAATGTGAAGGCGTTCCTGTTCTTTTTTACCGCACCATATGGTAAA
GTAAAGGATGACAACATGAA

Downstream 100 bases:

>100_bases
TCGCCCTTTCCTGCAGCATGAAAAACAAGGCGCTGCAACCATTTTCAGGCCATTGTTTTGGCGTATACGCAGCAATGAGA
AAGGTGTCCCGTACATTTGG

Product: thioredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MEGTRMKAIETNDQFTAAISGSKPAVIKFYTTWCPDCVRLNMFIDDIIRDYDQYDWFEINRDQFPELGEKYQVLGIPSLL
VFQNGEKIAHLHSANAKTPEEVRAFLQSLPA

Sequences:

>Translated_111_residues
MEGTRMKAIETNDQFTAAISGSKPAVIKFYTTWCPDCVRLNMFIDDIIRDYDQYDWFEINRDQFPELGEKYQVLGIPSLL
VFQNGEKIAHLHSANAKTPEEVRAFLQSLPA
>Mature_111_residues
MEGTRMKAIETNDQFTAAISGSKPAVIKFYTTWCPDCVRLNMFIDDIIRDYDQYDWFEINRDQFPELGEKYQVLGIPSLL
VFQNGEKIAHLHSANAKTPEEVRAFLQSLPA

Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323072, Length=86, Percent_Identity=32.5581395348837, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 12760; Mature: 12760

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGTRMKAIETNDQFTAAISGSKPAVIKFYTTWCPDCVRLNMFIDDIIRDYDQYDWFEIN
CCCCCCEEEECCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEC
RDQFPELGEKYQVLGIPSLLVFQNGEKIAHLHSANAKTPEEVRAFLQSLPA
CCCCCCCCCCEEEECCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEGTRMKAIETNDQFTAAISGSKPAVIKFYTTWCPDCVRLNMFIDDIIRDYDQYDWFEIN
CCCCCCEEEECCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEC
RDQFPELGEKYQVLGIPSLLVFQNGEKIAHLHSANAKTPEEVRAFLQSLPA
CCCCCCCCCCEEEECCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]