Click here to switch to the map view.

The map label for this gene is ydfS [H]

Identifier: 138894409

GI number: 138894409

Start: 808725

End: 809585

Strand: Direct

Name: ydfS [H]

Synonym: GTNG_0737

Alternate gene names: 138894409

Gene position: 808725-809585 (Clockwise)

Preceding gene: 138894408

Following gene: 138894412

Centisome position: 22.78

GC content: 45.18

Gene sequence:

>861_bases
ATGCCTGTATGGTTAGAAGTCGCCATTCGTTCCTTTTGTATTTTGATCGGACTGTTTATCATTACTCGCATTCTTGGCAA
AAAGCCGTTGGCAAAGCTGTCATTTTTCGAATATATTGTCGGCATTACCGTCGGGGATATTGCCGGAACAATGTCTGTCG
ATTTGGGAATTTCTCTTCAGGAAGGAATTACAAGTATTTTAATTTGGTCGCTCATTCCGGTGTTGGCCGCCCGCATTTCG
TTGCGCAACAAAAAGTTCCGCGATTTTGTCGAGGGCAACTCGACGGTTTTGATCAAAAACGGCAAAATTTTAGAGGAAAA
CTTAAAGCGGGAGAAATACACAGCTGACGAGTTGCTTGAGCAGTTGCGTAAAAAAGATGTGTTCCGTGTCGCCGATGTTG
AGTTTGCAATACTGGAGCCGAACGGTGATTTGAACGTCTTGTTGAAGCGGGAAAAGCAGCCGCTTACGGTTGGTGATGTA
TTTCCGAACCCGCCGCAGGAAAAAGAGCCACAAACCGTCATTATGGATGGAGTGATTTTGGACGAGCCACTCTCTACGTT
GGGACTTGGCCGCGGTTGGCTGAAGGAGCAACTTGATAAGCAAGGAGTAGCAGTCGAAAATGTCTTCCTCGCCCAAGTCG
ATTCATATGGACAGTTAACGATTGATTTGTACGATGACAAAATCCAAGTGGCCGAACCGCAGGAGAAAAAGTTGTTGTTG
GCTGCAATGAAAAAAGTACAAGCTGATTTTGAGTTATATGCGTTGCAAACCGATTCGAAAGAGGCAAAAGCGCTGTACGA
AACAAATGCGGTGAAAATGACGGAGCTCATCCAAAAAGTCGAGCCACTGTTGCGAAATTAA

Upstream 100 bases:

>100_bases
GATGCTCACCACCGAGGAGATCATCGCCGAGCTGAAAAAACGGATCAGCCGACTTGAGTTCGAGGAGCCGCAATATCATG
GAAAGTAAGGAGCATGATCC

Downstream 100 bases:

>100_bases
TATTGAGGAGGATCAGATCATGGAGAATAAACGGACAAAAACAACGGATGAGGAAATTCAAATTCAGCTTAAAGCAGATG
GCCGCCCTGAACGAGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MPVWLEVAIRSFCILIGLFIITRILGKKPLAKLSFFEYIVGITVGDIAGTMSVDLGISLQEGITSILIWSLIPVLAARIS
LRNKKFRDFVEGNSTVLIKNGKILEENLKREKYTADELLEQLRKKDVFRVADVEFAILEPNGDLNVLLKREKQPLTVGDV
FPNPPQEKEPQTVIMDGVILDEPLSTLGLGRGWLKEQLDKQGVAVENVFLAQVDSYGQLTIDLYDDKIQVAEPQEKKLLL
AAMKKVQADFELYALQTDSKEAKALYETNAVKMTELIQKVEPLLRN

Sequences:

>Translated_286_residues
MPVWLEVAIRSFCILIGLFIITRILGKKPLAKLSFFEYIVGITVGDIAGTMSVDLGISLQEGITSILIWSLIPVLAARIS
LRNKKFRDFVEGNSTVLIKNGKILEENLKREKYTADELLEQLRKKDVFRVADVEFAILEPNGDLNVLLKREKQPLTVGDV
FPNPPQEKEPQTVIMDGVILDEPLSTLGLGRGWLKEQLDKQGVAVENVFLAQVDSYGQLTIDLYDDKIQVAEPQEKKLLL
AAMKKVQADFELYALQTDSKEAKALYETNAVKMTELIQKVEPLLRN
>Mature_285_residues
PVWLEVAIRSFCILIGLFIITRILGKKPLAKLSFFEYIVGITVGDIAGTMSVDLGISLQEGITSILIWSLIPVLAARISL
RNKKFRDFVEGNSTVLIKNGKILEENLKREKYTADELLEQLRKKDVFRVADVEFAILEPNGDLNVLLKREKQPLTVGDVF
PNPPQEKEPQTVIMDGVILDEPLSTLGLGRGWLKEQLDKQGVAVENVFLAQVDSYGQLTIDLYDDKIQVAEPQEKKLLLA
AMKKVQADFELYALQTDSKEAKALYETNAVKMTELIQKVEPLLRN

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=141, Percent_Identity=26.241134751773, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 32155; Mature: 32024

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVWLEVAIRSFCILIGLFIITRILGKKPLAKLSFFEYIVGITVGDIAGTMSVDLGISLQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHH
EGITSILIWSLIPVLAARISLRNKKFRDFVEGNSTVLIKNGKILEENLKREKYTADELLE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHH
QLRKKDVFRVADVEFAILEPNGDLNVLLKREKQPLTVGDVFPNPPQEKEPQTVIMDGVIL
HHHHCCCEEEECCEEEEECCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCEEEECCEEE
DEPLSTLGLGRGWLKEQLDKQGVAVENVFLAQVDSYGQLTIDLYDDKIQVAEPQEKKLLL
CCCHHHHHCCCHHHHHHHHHCCCCHHHHHEEEECCCCEEEEEEECCEEEECCCHHHHHHH
AAMKKVQADFELYALQTDSKEAKALYETNAVKMTELIQKVEPLLRN
HHHHHHHCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PVWLEVAIRSFCILIGLFIITRILGKKPLAKLSFFEYIVGITVGDIAGTMSVDLGISLQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHH
EGITSILIWSLIPVLAARISLRNKKFRDFVEGNSTVLIKNGKILEENLKREKYTADELLE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHH
QLRKKDVFRVADVEFAILEPNGDLNVLLKREKQPLTVGDVFPNPPQEKEPQTVIMDGVIL
HHHHCCCEEEECCEEEEECCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCEEEECCEEE
DEPLSTLGLGRGWLKEQLDKQGVAVENVFLAQVDSYGQLTIDLYDDKIQVAEPQEKKLLL
CCCHHHHHCCCHHHHHHHHHCCCCHHHHHEEEECCCCEEEEEEECCEEEECCCHHHHHHH
AAMKKVQADFELYALQTDSKEAKALYETNAVKMTELIQKVEPLLRN
HHHHHHHCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]