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The map label for this gene is nirK [H]

Identifier: 138894322

GI number: 138894322

Start: 726332

End: 727390

Strand: Direct

Name: nirK [H]

Synonym: GTNG_0650

Alternate gene names: 138894322

Gene position: 726332-727390 (Clockwise)

Preceding gene: 138894321

Following gene: 138894324

Centisome position: 20.46

GC content: 48.73

Gene sequence:

>1059_bases
ATGAACCGAAATGTATATGCAGTGTTGTCGACCGTGTTAGCCGCCTCACTTTTAGCGGCGTGCAACAGCGGGGGGGAACA
GGTGAAGGCAGAAAGCAAGAACAAAACGGCAGCCACGCAACAGTCGGAGCCGAATGTTATAGCGGCGCACAAAGGGGTGA
ATCAAGCGCCGGTGCCGTTAAAAATGGAGCGGGTCGGCCCTCATGATGTCCACATCGAAATGACAGCGCAAATCACCGAC
ATTGAAATTGACAAAGGGAAAATTTACAAAGCATGGACATTTAACGGTCAAGCTCCCGGACCGCTCGTCGTTGTCAATGA
AGGGGATACGATCCATTTTACGTTGAAAAATATGGACCCGGTCGTCCCGCACAGCATGGATTTTCACGCCGTTCACGCTT
CACCGTCAAAAGATTTTATTGATGTGATGCCGAACAAATCGGGAACGTTCACCTATCCGGCAAATAAACCAGGTGTGTTT
ATGTACCATTGCGGTACGAAGCCAGTCTTGCAGCATATCGCCAACGGCATGCACGGCGTGATCATTGTCAAGCCAAAAAA
CGGTTATCCGACCGACAAGGAAGTAGATCGTGAATATGTGCTCATCCAAAATGAATGGTATAAATACAACGATATGAACG
ATTTCCAAAACGGTGTGCCAAGCTATGTCGTCTTCTCGTCCAAAGCGCTCAAACCTGGTGATCCAAATACGAACGGGGAC
ACATTTACCCTTAAAGAAAAGCCATTATTGGCGAAAGTCGGCGAGAAAATCCGCTTGTATATCAACAATGTCGGTCCGAA
CGAAGTAAGCTCATTCCATGTTGTTGGTACAGTATTCGATGATGTGTACCTTGATGGCAACCCGAACAACCATTTGCAAG
GGATGCAGACGGTGATGCTTCCGGCGAGCGGCGGTGCCGTTGTCGAATTTACTGTCACTCGACCGGGAACGTATCCGATC
GTTACTCATCAGTTTAATCATGCACAAAAAGGAGCCGTCGCCATGCTGAAGGTAACCGAAACCGGCGAAGACGACGGCAC
AGAAACGAGCGGACATTAA

Upstream 100 bases:

>100_bases
TCAAATATGCGTGTTCATTGGTGATAAAAATCACTAGGGGGAAAGCGAAAATGGCGTACGCTCAAGGTGTAAACGAATTT
CGCTAGAGGGGGGAAGAACG

Downstream 100 bases:

>100_bases
TTGATCCCGTTCCCAAACAGGATGGATGCCGCCCAAAACCTTATATTTCCTATATTATAAAATGGTTAAGAGAAAATGAA
GTGACATGCGTCACTTTCAG

Product: nitrite reductase

Products: NA

Alternate protein names: Major outer membrane protein Pan 1 [H]

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MNRNVYAVLSTVLAASLLAACNSGGEQVKAESKNKTAATQQSEPNVIAAHKGVNQAPVPLKMERVGPHDVHIEMTAQITD
IEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVF
MYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGD
TFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPI
VTHQFNHAQKGAVAMLKVTETGEDDGTETSGH

Sequences:

>Translated_352_residues
MNRNVYAVLSTVLAASLLAACNSGGEQVKAESKNKTAATQQSEPNVIAAHKGVNQAPVPLKMERVGPHDVHIEMTAQITD
IEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVF
MYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGD
TFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPI
VTHQFNHAQKGAVAMLKVTETGEDDGTETSGH
>Mature_352_residues
MNRNVYAVLSTVLAASLLAACNSGGEQVKAESKNKTAATQQSEPNVIAAHKGVNQAPVPLKMERVGPHDVHIEMTAQITD
IEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVF
MYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGD
TFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPI
VTHQFNHAQKGAVAMLKVTETGEDDGTETSGH

Specific function: Catalyzes the reduction of nitrite to nitric oxide (NO), probably with azurin as electron donor. Essential for growth and survival in oxygen-depleted environments. Can also provide protection against killing by normal human sera [H]

COG id: COG2132

COG function: function code Q; Putative multicopper oxidases

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 plastocyanin-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001117
- InterPro:   IPR011707
- InterPro:   IPR008972
- InterPro:   IPR001287 [H]

Pfam domain/function: PF00394 Cu-oxidase; PF07732 Cu-oxidase_3 [H]

EC number: =1.7.2.1 [H]

Molecular weight: Translated: 38383; Mature: 38383

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNVYAVLSTVLAASLLAACNSGGEQVKAESKNKTAATQQSEPNVIAAHKGVNQAPVPL
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCE
KMERVGPHDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDP
EEECCCCCEEEEEEEEEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCEEEEEECCCCC
VVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGV
CCCCCCCEEEEECCCCCCEEEECCCCCCCEECCCCCCCEEEEECCCHHHHHHHHCCCCEE
IIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGD
EEEECCCCCCCCCCCCCEEEEEECCCEEECCCCHHHCCCCCEEEEECCCCCCCCCCCCCC
TFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVML
EEEEECCCHHHHCCCEEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEEE
PASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTETGEDDGTETSGH
ECCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNRNVYAVLSTVLAASLLAACNSGGEQVKAESKNKTAATQQSEPNVIAAHKGVNQAPVPL
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCE
KMERVGPHDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDP
EEECCCCCEEEEEEEEEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCEEEEEECCCCC
VVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGV
CCCCCCCEEEEECCCCCCEEEECCCCCCCEECCCCCCCEEEEECCCHHHHHHHHCCCCEE
IIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGD
EEEECCCCCCCCCCCCCEEEEEECCCEEECCCCHHHCCCCCEEEEECCCCCCCCCCCCCC
TFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVML
EEEEECCCHHHHCCCEEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEEE
PASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTETGEDDGTETSGH
ECCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1383156; 1398981 [H]