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The map label for this gene is pqqE [H]

Identifier: 138894319

GI number: 138894319

Start: 720988

End: 722106

Strand: Direct

Name: pqqE [H]

Synonym: GTNG_0647

Alternate gene names: 138894319

Gene position: 720988-722106 (Clockwise)

Preceding gene: 138894318

Following gene: 138894320

Centisome position: 20.31

GC content: 51.39

Gene sequence:

>1119_bases
ATGCGCGACTTCAATGAAAATCCGTTTATCGTGATTTGGGAATTGACGCGAGCGTGCCAATTGAAATGCCTTCATTGCCG
CGCTGAGGCGCAATACCACCGCGACCCGCGCGAGTTGACGTTTGAAGAAGGCAAAAAGCTCATTGACGAGATTTATGATA
TGGATGAGCCGATGCTTGTTTTTACCGGCGGCGACCCGCTCATGCGGCCGGATGTGTACGATTTGGCAAAATATGCGATT
GATAAAGGATTGCGCGTGTCGATGACGCCAAGCGCGACGCCTAACGTGACGAAGGAGGCGATCCGCAAAGCGAAAGAAGT
TGGCTTGGCGCGTTGGGCGTTCAGCCTTGACGGACCGAACGCCGAGATTCACGACCATTTCCGCGGTACGAGCGGCTCGT
TTGATTTGACGATTCGCGCGATTCAATACTTGCATGAGCTTGACATTCCTGTGCAAATCAACACCGTCATTTCACGGTAC
AACGTTCATGTGCTTGATGAGATGGTGGAATTGGTTGAGAAGTTGAAATGTGTTCTTTGGAGTGTCTTTTTCCTCGTCCC
AACAGGGAGAGGGAAAGAGTCGGATATGATTTCCCCCGTCGAGCATGAACAGGTGTTCCGCTGGCTGTATGAAACGAGCA
AACGCGTTCCGTTTGACATAAAAACGACGGCCGGCCAACATTACCGTCGCGTTGTGTTGCAGTCGAAAATGCGCGAAGGG
AAAACGGCGAAAGATGGCATTCACTACGAAGATGTCTTGAATAAAGGATTAACCGGGCAAGTCGATGGGCTCGGCCGGGC
GCCAAGAGGGGTGAATGATGGCAACGGCTTCGTCTTTATTTCCCATATTGGCGACGTTTATCCGAGCGGGCTGTTGCCGG
TCAAAGCCGGGAACGTCCGGGAAACGCCGCTCGCTGACATTTACCGAAATTCGCCGATTTTCCAAGACTTGCGAAACCCA
GATAAATACAAAGGAAAATGCGGTGTCTGCGAATTCCGCCATGTGTGCGGCGGCTCACGTTCGCGTGCTTATGCTGTAAC
AGGCGATTATTTGGAAAGCGAACCGTACTGCATCTATATTCCGAAGGCGCTGCGAAACAAAGGAACAAATTGTTGCTAG

Upstream 100 bases:

>100_bases
CCGTCGATTGAACAAGTTTGTTCGTCTCATTCATTATGTGATGAAAATCACATAATGCGCCCAGTCATTGCGTTACAATG
GAGGCCAAGGAGGGAACTGT

Downstream 100 bases:

>100_bases
GCCAACGATTGATCAACATCACATTTGGATGTTAGGTTGTCTTTCTCTTTTCGAAGGGAGCACCCGCTTTGTTTATGTTT
GATTTTGCGCTTGACAAAGA

Product: coenzyme PQQ synthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MRDFNENPFIVIWELTRACQLKCLHCRAEAQYHRDPRELTFEEGKKLIDEIYDMDEPMLVFTGGDPLMRPDVYDLAKYAI
DKGLRVSMTPSATPNVTKEAIRKAKEVGLARWAFSLDGPNAEIHDHFRGTSGSFDLTIRAIQYLHELDIPVQINTVISRY
NVHVLDEMVELVEKLKCVLWSVFFLVPTGRGKESDMISPVEHEQVFRWLYETSKRVPFDIKTTAGQHYRRVVLQSKMREG
KTAKDGIHYEDVLNKGLTGQVDGLGRAPRGVNDGNGFVFISHIGDVYPSGLLPVKAGNVRETPLADIYRNSPIFQDLRNP
DKYKGKCGVCEFRHVCGGSRSRAYAVTGDYLESEPYCIYIPKALRNKGTNCC

Sequences:

>Translated_372_residues
MRDFNENPFIVIWELTRACQLKCLHCRAEAQYHRDPRELTFEEGKKLIDEIYDMDEPMLVFTGGDPLMRPDVYDLAKYAI
DKGLRVSMTPSATPNVTKEAIRKAKEVGLARWAFSLDGPNAEIHDHFRGTSGSFDLTIRAIQYLHELDIPVQINTVISRY
NVHVLDEMVELVEKLKCVLWSVFFLVPTGRGKESDMISPVEHEQVFRWLYETSKRVPFDIKTTAGQHYRRVVLQSKMREG
KTAKDGIHYEDVLNKGLTGQVDGLGRAPRGVNDGNGFVFISHIGDVYPSGLLPVKAGNVRETPLADIYRNSPIFQDLRNP
DKYKGKCGVCEFRHVCGGSRSRAYAVTGDYLESEPYCIYIPKALRNKGTNCC
>Mature_372_residues
MRDFNENPFIVIWELTRACQLKCLHCRAEAQYHRDPRELTFEEGKKLIDEIYDMDEPMLVFTGGDPLMRPDVYDLAKYAI
DKGLRVSMTPSATPNVTKEAIRKAKEVGLARWAFSLDGPNAEIHDHFRGTSGSFDLTIRAIQYLHELDIPVQINTVISRY
NVHVLDEMVELVEKLKCVLWSVFFLVPTGRGKESDMISPVEHEQVFRWLYETSKRVPFDIKTTAGQHYRRVVLQSKMREG
KTAKDGIHYEDVLNKGLTGQVDGLGRAPRGVNDGNGFVFISHIGDVYPSGLLPVKAGNVRETPLADIYRNSPIFQDLRNP
DKYKGKCGVCEFRHVCGGSRSRAYAVTGDYLESEPYCIYIPKALRNKGTNCC

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42256; Mature: 42256

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFNENPFIVIWELTRACQLKCLHCRAEAQYHRDPRELTFEEGKKLIDEIYDMDEPMLV
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCEEE
FTGGDPLMRPDVYDLAKYAIDKGLRVSMTPSATPNVTKEAIRKAKEVGLARWAFSLDGPN
EECCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCHHHEEEEECCCC
AEIHDHFRGTSGSFDLTIRAIQYLHELDIPVQINTVISRYNVHVLDEMVELVEKLKCVLW
CHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVFFLVPTGRGKESDMISPVEHEQVFRWLYETSKRVPFDIKTTAGQHYRRVVLQSKMREG
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCC
KTAKDGIHYEDVLNKGLTGQVDGLGRAPRGVNDGNGFVFISHIGDVYPSGLLPVKAGNVR
CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCC
ETPLADIYRNSPIFQDLRNPDKYKGKCGVCEFRHVCGGSRSRAYAVTGDYLESEPYCIYI
CCCHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEC
PKALRNKGTNCC
CHHHHCCCCCCC
>Mature Secondary Structure
MRDFNENPFIVIWELTRACQLKCLHCRAEAQYHRDPRELTFEEGKKLIDEIYDMDEPMLV
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCEEE
FTGGDPLMRPDVYDLAKYAIDKGLRVSMTPSATPNVTKEAIRKAKEVGLARWAFSLDGPN
EECCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCHHHEEEEECCCC
AEIHDHFRGTSGSFDLTIRAIQYLHELDIPVQINTVISRYNVHVLDEMVELVEKLKCVLW
CHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVFFLVPTGRGKESDMISPVEHEQVFRWLYETSKRVPFDIKTTAGQHYRRVVLQSKMREG
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCC
KTAKDGIHYEDVLNKGLTGQVDGLGRAPRGVNDGNGFVFISHIGDVYPSGLLPVKAGNVR
CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCC
ETPLADIYRNSPIFQDLRNPDKYKGKCGVCEFRHVCGGSRSRAYAVTGDYLESEPYCIYI
CCCHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEC
PKALRNKGTNCC
CHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]