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The map label for this gene is yitU [H]

Identifier: 138894306

GI number: 138894306

Start: 708186

End: 708992

Strand: Reverse

Name: yitU [H]

Synonym: GTNG_0634

Alternate gene names: 138894306

Gene position: 708992-708186 (Counterclockwise)

Preceding gene: 138894310

Following gene: 138894305

Centisome position: 19.97

GC content: 49.94

Gene sequence:

>807_bases
ATGAAACAATATTTAATCGCCTTAGATCTTGATGGGACGTTGTTGAAAGAAGATAAGACGATTTCCCCATTTACAAAGGA
TGTGATTCGCCGCGCGATCGACGCTGGCCATTTGGTCGTTATCGCCACCGGCCGGCCGTATCGGGCGAGCCGCATGTATT
ACGAGGAACTGAACCTCACCACACCGATTGTCAATTTCAACGGTGCGTTTGTTCACCACCCGCGCCAACCGTCATGGGGA
ATGCGCCATTTTCCGTTGCCATTGCCTGTCGTTAAAGACATTGTCGAACTCGGGGAAACGTATCGAATCAAAAACATTTT
GGCAGAAGTGATGGACGACGTCTATTCTCACGAACATGACGACGTCTTGCTCGACATCATCCGTCTCGGTAACCCAACCG
TGGAAATCGGCGATTTGCGCCGCTCGCTCGGCAAAGACCCGACGAGCGTGCTCGTTTATACAGACCGTGAGCATATCGAA
CAAATCCGATCCCATTTATCCAATGTATATGCCAATGTGTTGCACCATCGGCGTTGGAATGAACCTTGGCACGTCATTGA
AATCATCCGCCACGGCGTCCATAAAGCCGCCGGCTTAAAACAAGTCGCCGATTACTTCGGCATCCCGAGGGAACGCGTCA
TTGCTTTTGGTGATGAAGACAATGATTTAGAAATGATTGATTGGGCTGGGCTTGGCGTCGCCATGGGCAACGCCATCGAA
CCATTGAAAACAGTGGCTGACGATGTGACAACAACGAATGAAGAAGATGGCATCGGTGTATATTTGCAAGACGTTCTAGG
CCTATAG

Upstream 100 bases:

>100_bases
TCCTTTTCATCATGGTATATTGTACCATGTAGACAATTATTTCGAAAAAGAGTTACACTATGTACTAGGAAAAAAATGGC
CAAAAGCAAAGGAGAGCGTA

Downstream 100 bases:

>100_bases
CTATTCCATCCATCTCACCACGGGAGGTTTCACAAGCCTCCCTACTGCTTTCTTTCTGCTTCTCACCGACTGTGGACCTT
CCTGACGCACAAAGCCGTTT

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKQYLIALDLDGTLLKEDKTISPFTKDVIRRAIDAGHLVVIATGRPYRASRMYYEELNLTTPIVNFNGAFVHHPRQPSWG
MRHFPLPLPVVKDIVELGETYRIKNILAEVMDDVYSHEHDDVLLDIIRLGNPTVEIGDLRRSLGKDPTSVLVYTDREHIE
QIRSHLSNVYANVLHHRRWNEPWHVIEIIRHGVHKAAGLKQVADYFGIPRERVIAFGDEDNDLEMIDWAGLGVAMGNAIE
PLKTVADDVTTTNEEDGIGVYLQDVLGL

Sequences:

>Translated_268_residues
MKQYLIALDLDGTLLKEDKTISPFTKDVIRRAIDAGHLVVIATGRPYRASRMYYEELNLTTPIVNFNGAFVHHPRQPSWG
MRHFPLPLPVVKDIVELGETYRIKNILAEVMDDVYSHEHDDVLLDIIRLGNPTVEIGDLRRSLGKDPTSVLVYTDREHIE
QIRSHLSNVYANVLHHRRWNEPWHVIEIIRHGVHKAAGLKQVADYFGIPRERVIAFGDEDNDLEMIDWAGLGVAMGNAIE
PLKTVADDVTTTNEEDGIGVYLQDVLGL
>Mature_268_residues
MKQYLIALDLDGTLLKEDKTISPFTKDVIRRAIDAGHLVVIATGRPYRASRMYYEELNLTTPIVNFNGAFVHHPRQPSWG
MRHFPLPLPVVKDIVELGETYRIKNILAEVMDDVYSHEHDDVLLDIIRLGNPTVEIGDLRRSLGKDPTSVLVYTDREHIE
QIRSHLSNVYANVLHHRRWNEPWHVIEIIRHGVHKAAGLKQVADYFGIPRERVIAFGDEDNDLEMIDWAGLGVAMGNAIE
PLKTVADDVTTTNEEDGIGVYLQDVLGL

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=282, Percent_Identity=31.5602836879433, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786982, Length=279, Percent_Identity=29.7491039426523, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 30427; Mature: 30427

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQYLIALDLDGTLLKEDKTISPFTKDVIRRAIDAGHLVVIATGRPYRASRMYYEELNLT
CCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCC
TPIVNFNGAFVHHPRQPSWGMRHFPLPLPVVKDIVELGETYRIKNILAEVMDDVYSHEHD
CCEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC
DVLLDIIRLGNPTVEIGDLRRSLGKDPTSVLVYTDREHIEQIRSHLSNVYANVLHHRRWN
HHHHHHHHCCCCCEEHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCC
EPWHVIEIIRHGVHKAAGLKQVADYFGIPRERVIAFGDEDNDLEMIDWAGLGVAMGNAIE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCEEEEEECCCHHHHCCHHH
PLKTVADDVTTTNEEDGIGVYLQDVLGL
HHHHHHHHHCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKQYLIALDLDGTLLKEDKTISPFTKDVIRRAIDAGHLVVIATGRPYRASRMYYEELNLT
CCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCC
TPIVNFNGAFVHHPRQPSWGMRHFPLPLPVVKDIVELGETYRIKNILAEVMDDVYSHEHD
CCEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCC
DVLLDIIRLGNPTVEIGDLRRSLGKDPTSVLVYTDREHIEQIRSHLSNVYANVLHHRRWN
HHHHHHHHCCCCCEEHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCC
EPWHVIEIIRHGVHKAAGLKQVADYFGIPRERVIAFGDEDNDLEMIDWAGLGVAMGNAIE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCEEEEEECCCHHHHCCHHH
PLKTVADDVTTTNEEDGIGVYLQDVLGL
HHHHHHHHHCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]