| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is yxaH [H]
Identifier: 138894275
GI number: 138894275
Start: 664833
End: 666002
Strand: Direct
Name: yxaH [H]
Synonym: GTNG_0601
Alternate gene names: 138894275
Gene position: 664833-666002 (Clockwise)
Preceding gene: 138894273
Following gene: 138894277
Centisome position: 18.73
GC content: 51.37
Gene sequence:
>1170_bases GTGACGCCTTTATCGGCAGATCGAATTGCGGCAGTTGATGTTTTGCGCGGGTTTGCCTTGTTTGGTATTTTGCTTGTTAA TATGCGTTATTTTTCGTCACCGGCGTTATATGTGGAAGACGTTGACGGCAACACCTTCAACCGTGTGGTTGCCGCAGCGA TCGATCTTTTGTTTGAAGCAAGCGCCTATCCGCTGTTTGCCTTTTTATTCGGATTCGGTACGATCGTACTTTGCCACCGA TTGCACCAGCGTGGGGAGCGGCCGTTTCCGATTTTGCTGCGCCGCTTCCTCCTTTTGCTTGTGATCGGCATCATTCATGC ATTCGGCCTTTGGTTTGGCGATATTTTAATTCCGTACGCGCTTGCCGGGCTTATTTTGCTTTTGTTCATGAACGCCCCGT CACATTGGTGGCGGATGGCGGCGTTGACCGGTTTTTTCTTTTTTCACATCCTCGTAATATTGTTGCTATTCATGAGTATG CTGGCCGGGGGAACGGAGACAGCTGAGGGCCAAGCGGCAGAGGCAGCTGCCGCCCTTCACCATTATCAAAGCGGAACGTT TCGCGAGGTATTTTGGCAGCGATGGCACGATTGGTCGTATCTCAATGGTGATGGCGGACTTTTATTTACGTTGTTGGCTG TATTGCCGTTTTGTTTCCTCGGCGGATATGCCGCTAAAGAGCATTGGCTCGAGGCCGGACGCTATCCAACCGCTGCGCTG CGACGCTTGATGAGTGGAGCGCTATGTCTTGGCCTGGCGTTAAAAACGATTCCGTATTGGGCTGGGGCCAACACGTTGAC GATGTATATTCAAGACAACTTTGGAGGTGCTGTTTTGGCAGTGTTCTACGCCATTGCTGCCATGTTGGTTTGCAGGAAAA CGAACTGGCAGCCAGTGTGGCGATGGCTGCAAGATGCCGGAAGAATGTCGCTTACTCACTATCTCACACAGTCACTCATT TGCACCTCCCTTTTTTACAGCTATGGTCTTGGATGGTACGGACAATTGAACGAATGGCAAGGAGCGCTATTGGCGATCGG GATATATGTCGCTAGTTTATGGGCAAGCCACTGTTGGTTCACCCGATTTCGTTTTGGCCCGGCAGAGTGGCTGTGGAGAT GGGGAACGTACGGGATGCGTCCACCTTTTCGACGACAGCCGGGTCAATAA
Upstream 100 bases:
>100_bases CTGTAAAGTGAGCTGATGAGGCGTTGGGCGATGCGATGATGTTGCTGAATAGGTGAGCTGGCCTCCTCGACATAACGGAG AGATAGAAAGAAGGGATCAT
Downstream 100 bases:
>100_bases AAAATCCGTCCCTCATTGGACGGATGGAACAGGCGGTTCAAAAACCGTGGTTTGCTGCAAATATTGGTTGATCAATCGGT CAAGCTCTTGGCTGCATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTPLSADRIAAVDVLRGFALFGILLVNMRYFSSPALYVEDVDGNTFNRVVAAAIDLLFEASAYPLFAFLFGFGTIVLCHR LHQRGERPFPILLRRFLLLLVIGIIHAFGLWFGDILIPYALAGLILLLFMNAPSHWWRMAALTGFFFFHILVILLLFMSM LAGGTETAEGQAAEAAAALHHYQSGTFREVFWQRWHDWSYLNGDGGLLFTLLAVLPFCFLGGYAAKEHWLEAGRYPTAAL RRLMSGALCLGLALKTIPYWAGANTLTMYIQDNFGGAVLAVFYAIAAMLVCRKTNWQPVWRWLQDAGRMSLTHYLTQSLI CTSLFYSYGLGWYGQLNEWQGALLAIGIYVASLWASHCWFTRFRFGPAEWLWRWGTYGMRPPFRRQPGQ
Sequences:
>Translated_389_residues MTPLSADRIAAVDVLRGFALFGILLVNMRYFSSPALYVEDVDGNTFNRVVAAAIDLLFEASAYPLFAFLFGFGTIVLCHR LHQRGERPFPILLRRFLLLLVIGIIHAFGLWFGDILIPYALAGLILLLFMNAPSHWWRMAALTGFFFFHILVILLLFMSM LAGGTETAEGQAAEAAAALHHYQSGTFREVFWQRWHDWSYLNGDGGLLFTLLAVLPFCFLGGYAAKEHWLEAGRYPTAAL RRLMSGALCLGLALKTIPYWAGANTLTMYIQDNFGGAVLAVFYAIAAMLVCRKTNWQPVWRWLQDAGRMSLTHYLTQSLI CTSLFYSYGLGWYGQLNEWQGALLAIGIYVASLWASHCWFTRFRFGPAEWLWRWGTYGMRPPFRRQPGQ >Mature_388_residues TPLSADRIAAVDVLRGFALFGILLVNMRYFSSPALYVEDVDGNTFNRVVAAAIDLLFEASAYPLFAFLFGFGTIVLCHRL HQRGERPFPILLRRFLLLLVIGIIHAFGLWFGDILIPYALAGLILLLFMNAPSHWWRMAALTGFFFFHILVILLLFMSML AGGTETAEGQAAEAAAALHHYQSGTFREVFWQRWHDWSYLNGDGGLLFTLLAVLPFCFLGGYAAKEHWLEAGRYPTAALR RLMSGALCLGLALKTIPYWAGANTLTMYIQDNFGGAVLAVFYAIAAMLVCRKTNWQPVWRWLQDAGRMSLTHYLTQSLIC TSLFYSYGLGWYGQLNEWQGALLAIGIYVASLWASHCWFTRFRFGPAEWLWRWGTYGMRPPFRRQPGQ
Specific function: Involved in transport (Potential) [H]
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007349 [H]
Pfam domain/function: PF04235 DUF418 [H]
EC number: NA
Molecular weight: Translated: 44077; Mature: 43946
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLSADRIAAVDVLRGFALFGILLVNMRYFSSPALYVEDVDGNTFNRVVAAAIDLLFEA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHC SAYPLFAFLFGFGTIVLCHRLHQRGERPFPILLRRFLLLLVIGIIHAFGLWFGDILIPYA CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGLILLLFMNAPSHWWRMAALTGFFFFHILVILLLFMSMLAGGTETAEGQAAEAAAALH HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH HYQSGTFREVFWQRWHDWSYLNGDGGLLFTLLAVLPFCFLGGYAAKEHWLEAGRYPTAAL HHCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHH RRLMSGALCLGLALKTIPYWAGANTLTMYIQDNFGGAVLAVFYAIAAMLVCRKTNWQPVW HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHH RWLQDAGRMSLTHYLTQSLICTSLFYSYGLGWYGQLNEWQGALLAIGIYVASLWASHCWF HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TRFRFGPAEWLWRWGTYGMRPPFRRQPGQ HHHCCCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TPLSADRIAAVDVLRGFALFGILLVNMRYFSSPALYVEDVDGNTFNRVVAAAIDLLFEA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHC SAYPLFAFLFGFGTIVLCHRLHQRGERPFPILLRRFLLLLVIGIIHAFGLWFGDILIPYA CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGLILLLFMNAPSHWWRMAALTGFFFFHILVILLLFMSMLAGGTETAEGQAAEAAAALH HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH HYQSGTFREVFWQRWHDWSYLNGDGGLLFTLLAVLPFCFLGGYAAKEHWLEAGRYPTAAL HHCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHH RRLMSGALCLGLALKTIPYWAGANTLTMYIQDNFGGAVLAVFYAIAAMLVCRKTNWQPVW HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHH RWLQDAGRMSLTHYLTQSLICTSLFYSYGLGWYGQLNEWQGALLAIGIYVASLWASHCWF HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TRFRFGPAEWLWRWGTYGMRPPFRRQPGQ HHHCCCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377 [H]