Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is yheD [H]
Identifier: 138894223
GI number: 138894223
Start: 610844
End: 611920
Strand: Reverse
Name: yheD [H]
Synonym: GTNG_0549
Alternate gene names: 138894223
Gene position: 611920-610844 (Counterclockwise)
Preceding gene: 138894228
Following gene: 138894222
Centisome position: 17.24
GC content: 51.35
Gene sequence:
>1077_bases ATGAGCGAACAACGAACCGTTGCAGTGTTAACGGAAATAACGGAAACAACTGAACAACCATCGTTTGGCTCTATTCATTG TTTTTGTGAGGAATTAGCGCAGTGCGCAAAAGAGCGCGGCCTCTTTTTTTACGTCACATCGCCGTCGCTTTATTTGCAAC GCATCGGCTACCAGTGGATTGGCGGCGAATGGATGAAACGGGACGTGCCTCCAGCTGACGTCATCTACAACCGGCTCCAC TCGCGACAATCGGAACATTCCCCTTTGTTTGCTGAATTGCTCACCCGGCTTGCTGTAGAAGGCGGATCGATGTTCAATCA TCGTTTTTTGCACAAATGGGAAGTGTACCGCTACTTCGAGCAACATGAGTACTTGCATCCGTATTTGCCAAAAACGGCGT TATGGAGCAATGAAGATACGCTTGAAGCCTTTCTCACCGCCTTCCCATCTGTCTTTCTTAAACCGATCCACGGCAGCCAA GGGCGGGGAATTTTCCGTCTTGAACGTTCGGACGGCACCATTCGCCTCCGTCATTCCACTTCCGCTTCGACAACCACATA CAGCTCGATAGATACTTTAGTTTCCGCTTTGCGACGTCGAACGAAGGCTCCAATGATCATTCAGCAAGGACTGGAGATCC ACACGATTGACGGCCGACCGGTCGATTTCCGACTCCTTTGCCATCGCGTCCGCAACAATCATTGGCGCGTCACCTCAGCG GTTGCCCGTGTGGCGCCGCCCGACCAGTTTGTCGCCAACCTCGCTCGCGGCGGGGAACTGATGGCGATCAATACGGTATT GAGGGAATGGTATACGGCGTCAGACGCTTTCCAACAAAAACAACTTCTCAAAGAAATTGCGATGGAAGCAGCAACCGTGC TGGCGCTTGAGGCGGAAGGGTTATACGGGGAGTTGGGCATTGATCTCGCCATCGATGTTCATGATCAGCCATGGATCATT GAAGTGAATACAAAGCCGTCGAAACAAACGGATATGACGTCCGCTCCACAAACTGTTCGCCCATCGGCGAAAGCGATCAT CGAGTATTGTTTGACATTGATGGAGGAAAAGGAGTGA
Upstream 100 bases:
>100_bases TGTCACCAAACGGCAGCCCTCATCATACGATACGATATAAACGTTTGCCTAATTTTTCATTATAGAGCTTGCCTGATGAA TGCGCAAATGAGGGACTGCG
Downstream 100 bases:
>100_bases ACGATGTTGATTTCACTCGGTTTTGTCACTCTTGACGAACAACAAGAGCTCACATATTTTACCGAGGTGGCCAAACGCGC CAATCACTATGGCATTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSEQRTVAVLTEITETTEQPSFGSIHCFCEELAQCAKERGLFFYVTSPSLYLQRIGYQWIGGEWMKRDVPPADVIYNRLH SRQSEHSPLFAELLTRLAVEGGSMFNHRFLHKWEVYRYFEQHEYLHPYLPKTALWSNEDTLEAFLTAFPSVFLKPIHGSQ GRGIFRLERSDGTIRLRHSTSASTTTYSSIDTLVSALRRRTKAPMIIQQGLEIHTIDGRPVDFRLLCHRVRNNHWRVTSA VARVAPPDQFVANLARGGELMAINTVLREWYTASDAFQQKQLLKEIAMEAATVLALEAEGLYGELGIDLAIDVHDQPWII EVNTKPSKQTDMTSAPQTVRPSAKAIIEYCLTLMEEKE
Sequences:
>Translated_358_residues MSEQRTVAVLTEITETTEQPSFGSIHCFCEELAQCAKERGLFFYVTSPSLYLQRIGYQWIGGEWMKRDVPPADVIYNRLH SRQSEHSPLFAELLTRLAVEGGSMFNHRFLHKWEVYRYFEQHEYLHPYLPKTALWSNEDTLEAFLTAFPSVFLKPIHGSQ GRGIFRLERSDGTIRLRHSTSASTTTYSSIDTLVSALRRRTKAPMIIQQGLEIHTIDGRPVDFRLLCHRVRNNHWRVTSA VARVAPPDQFVANLARGGELMAINTVLREWYTASDAFQQKQLLKEIAMEAATVLALEAEGLYGELGIDLAIDVHDQPWII EVNTKPSKQTDMTSAPQTVRPSAKAIIEYCLTLMEEKE >Mature_357_residues SEQRTVAVLTEITETTEQPSFGSIHCFCEELAQCAKERGLFFYVTSPSLYLQRIGYQWIGGEWMKRDVPPADVIYNRLHS RQSEHSPLFAELLTRLAVEGGSMFNHRFLHKWEVYRYFEQHEYLHPYLPKTALWSNEDTLEAFLTAFPSVFLKPIHGSQG RGIFRLERSDGTIRLRHSTSASTTTYSSIDTLVSALRRRTKAPMIIQQGLEIHTIDGRPVDFRLLCHRVRNNHWRVTSAV ARVAPPDQFVANLARGGELMAINTVLREWYTASDAFQQKQLLKEIAMEAATVLALEAEGLYGELGIDLAIDVHDQPWIIE VNTKPSKQTDMTSAPQTVRPSAKAIIEYCLTLMEEKE
Specific function: Involved in sporulation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane; Peripheral membrane protein. Spore wall, spore coat. Note=Forms two rings around the forespore that are offset from its midpoint, before it eventually redistributes to form a shell around the developing spore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yheC/yheD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40887; Mature: 40756
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQRTVAVLTEITETTEQPSFGSIHCFCEELAQCAKERGLFFYVTSPSLYLQRIGYQWI CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHCCHHC GGEWMKRDVPPADVIYNRLHSRQSEHSPLFAELLTRLAVEGGSMFNHRFLHKWEVYRYFE CCHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QHEYLHPYLPKTALWSNEDTLEAFLTAFPSVFLKPIHGSQGRGIFRLERSDGTIRLRHST HHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCEEEEEECC SASTTTYSSIDTLVSALRRRTKAPMIIQQGLEIHTIDGRPVDFRLLCHRVRNNHWRVTSA CCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHH VARVAPPDQFVANLARGGELMAINTVLREWYTASDAFQQKQLLKEIAMEAATVLALEAEG HHHCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC LYGELGIDLAIDVHDQPWIIEVNTKPSKQTDMTSAPQTVRPSAKAIIEYCLTLMEEKE CEEECCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEQRTVAVLTEITETTEQPSFGSIHCFCEELAQCAKERGLFFYVTSPSLYLQRIGYQWI CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHCCHHC GGEWMKRDVPPADVIYNRLHSRQSEHSPLFAELLTRLAVEGGSMFNHRFLHKWEVYRYFE CCHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QHEYLHPYLPKTALWSNEDTLEAFLTAFPSVFLKPIHGSQGRGIFRLERSDGTIRLRHST HHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCEEEEEECC SASTTTYSSIDTLVSALRRRTKAPMIIQQGLEIHTIDGRPVDFRLLCHRVRNNHWRVTSA CCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCCCCCHHHHHHHHHHCCCEEHHHH VARVAPPDQFVANLARGGELMAINTVLREWYTASDAFQQKQLLKEIAMEAATVLALEAEG HHHCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC LYGELGIDLAIDVHDQPWIIEVNTKPSKQTDMTSAPQTVRPSAKAIIEYCLTLMEEKE CEEECCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]