| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is yjbE [H]
Identifier: 138894197
GI number: 138894197
Start: 584820
End: 585518
Strand: Direct
Name: yjbE [H]
Synonym: GTNG_0523
Alternate gene names: 138894197
Gene position: 584820-585518 (Clockwise)
Preceding gene: 138894196
Following gene: 138894199
Centisome position: 16.47
GC content: 46.64
Gene sequence:
>699_bases ATGTCTGTGGATTTATTTTCTCCAGAATTTTGGACGGCGTTGCTGTCGATTGTTATTATTGACCTTGTGTTGGCAGGGGA TAATGCGATTGTCATTGGATTGGCAGCCCGCAATTTGCCAAAACATCAGCAAAAAAAGGCGGTGATTTGGGGGACTGTCG GTGCTGTCGTTATCCGAGCGATGGCAACGATTTTCGTTGTATGGCTCCTTAAAATTCCAGGTCTCTTGCTTGTCGGTGGT CTTTTACTTGTCTGGATCGCTTATAAGTTGCTCGTTGAGGAAAAGGGGCATGATGATATAGAAGCGGGGGGGAGTTTATG GGAAGCAGTCCGCACGATTATTATTGCTGATGCATTGATGGGACTTGATAACGTGTTGGCGGTGGCTGGTGCCGCGCATG GGCATTTCCTCCTCGTTATCTTAGGGCTGTTGATTTCCGTTCCGATTATGGTGTGGGGCAGCACGCTCATTTTAAAATGG ATCGAACGCTTCCCGATCATTATTACGATTGGTGCTGGCATTCTCGCTTGGACGGCATCAAAAATGATCGTCGACGAGCC GTTTTTGAAAGGATACTTTGCCAACCCTGTGATTAAATACGGATTTGAGCTGCTTCTTGTCGCTGCTGTCATTGCGATTG GAACGCAGAAAAAAAGAAAGGCCGCCAAAAAACCGCATTTGAAAGTCGCCAATGAATAA
Upstream 100 bases:
>100_bases TGGCTTTATCGATGATTTTACCGTTTTCATGTTTATTTTGCAGCAAATCATTAAGATGGCTCCGGCTTCATTAAAGGAAA AATATAACTTGTAAAGGGGG
Downstream 100 bases:
>100_bases TTGGCGGCTTTTATAATGGGCGGTGACGGGACAAACAGCTACTTCCATTTCAACAAAAGGATTTGTAACAGCCGACCGAT GGCTACCCCAGGGATGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSVDLFSPEFWTALLSIVIIDLVLAGDNAIVIGLAARNLPKHQQKKAVIWGTVGAVVIRAMATIFVVWLLKIPGLLLVGG LLLVWIAYKLLVEEKGHDDIEAGGSLWEAVRTIIIADALMGLDNVLAVAGAAHGHFLLVILGLLISVPIMVWGSTLILKW IERFPIIITIGAGILAWTASKMIVDEPFLKGYFANPVIKYGFELLLVAAVIAIGTQKKRKAAKKPHLKVANE
Sequences:
>Translated_232_residues MSVDLFSPEFWTALLSIVIIDLVLAGDNAIVIGLAARNLPKHQQKKAVIWGTVGAVVIRAMATIFVVWLLKIPGLLLVGG LLLVWIAYKLLVEEKGHDDIEAGGSLWEAVRTIIIADALMGLDNVLAVAGAAHGHFLLVILGLLISVPIMVWGSTLILKW IERFPIIITIGAGILAWTASKMIVDEPFLKGYFANPVIKYGFELLLVAAVIAIGTQKKRKAAKKPHLKVANE >Mature_231_residues SVDLFSPEFWTALLSIVIIDLVLAGDNAIVIGLAARNLPKHQQKKAVIWGTVGAVVIRAMATIFVVWLLKIPGLLLVGGL LLVWIAYKLLVEEKGHDDIEAGGSLWEAVRTIIIADALMGLDNVLAVAGAAHGHFLLVILGLLISVPIMVWGSTLILKWI ERFPIIITIGAGILAWTASKMIVDEPFLKGYFANPVIKYGFELLLVAAVIAIGTQKKRKAAKKPHLKVANE
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=186, Percent_Identity=27.4193548387097, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI87082033, Length=189, Percent_Identity=24.8677248677249, Blast_Score=64, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022301 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 25108; Mature: 24976
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDLFSPEFWTALLSIVIIDLVLAGDNAIVIGLAARNLPKHQQKKAVIWGTVGAVVIRA CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCHHHCCCHHHHHHHHHHHHH MATIFVVWLLKIPGLLLVGGLLLVWIAYKLLVEEKGHDDIEAGGSLWEAVRTIIIADALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHH GLDNVLAVAGAAHGHFLLVILGLLISVPIMVWGSTLILKWIERFPIIITIGAGILAWTAS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH KMIVDEPFLKGYFANPVIKYGFELLLVAAVIAIGTQKKRKAAKKPHLKVANE HHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure SVDLFSPEFWTALLSIVIIDLVLAGDNAIVIGLAARNLPKHQQKKAVIWGTVGAVVIRA CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCHHHCCCHHHHHHHHHHHHH MATIFVVWLLKIPGLLLVGGLLLVWIAYKLLVEEKGHDDIEAGGSLWEAVRTIIIADALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHH GLDNVLAVAGAAHGHFLLVILGLLISVPIMVWGSTLILKWIERFPIIITIGAGILAWTAS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH KMIVDEPFLKGYFANPVIKYGFELLLVAAVIAIGTQKKRKAAKKPHLKVANE HHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]