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The map label for this gene is ygaE [H]

Identifier: 138894155

GI number: 138894155

Start: 535649

End: 536728

Strand: Reverse

Name: ygaE [H]

Synonym: GTNG_0481

Alternate gene names: 138894155

Gene position: 536728-535649 (Counterclockwise)

Preceding gene: 138894156

Following gene: 138894143

Centisome position: 15.12

GC content: 47.5

Gene sequence:

>1080_bases
ATGAAGCTCGGTGCCCGCATTTTTAAAACGGGAATCGCCGTGACGTTGGCTCTGTTTTTAGCGGCGCTTTTTCATTTTCC
ATCACCAGTGTTTGCCGGCATTTCTGCGGTGTTCGCCATGCAGCCGACCATTTATCGTTCCTACTTATCATTAATTGAAC
AAGTACAAGCGAACGTGATCGGCGCCTTGTTCGCAATCACCGCGGTTCTCATCCTTGGCCGTGACCCACTTATCGTCGGC
TTGACGCTCATGATCGTCATCGCTCTTTGCCTAAAAATGCGTCTTGAATCGTCGACGATTTCGGTGGCGCTTGTGACCGT
TATCGCGATTATGGAATATACGGAACGCCAGTTTATCGAATTTGCAGCTATCCGCTTTTTAACCATTATGCTCGGCATTT
TCGCCGCCTTTCTCGTCAACTTGATTTTCTTGCCGCCAAAGTACGAAAAAAAGTTGTACGAAAAAATTAGTGGTGAGACG
GAAACGATTTTAAAATGGATCCGACTGCATAAGCAACAAGTTGCCGACCATCATCATTTAAAAGATGAAATCGAAACGTT
GCTCGATGAAATGACGAAACTCAAGCATCTTTATTTCATGTATAAGGAAGAGCGCACGTATTTCCGTCGCCAGCGCTTCC
AAAAATCGCGCAAGCTCGTTTTATACCGCCAGATGATTGCTGCGGCTGACCGAGCGCTGTCAGTATTAAAATGGCTTCAT
CGCCTTGAAAACGAGCTCGGACGTCTGCCTGCTGAGCTCCACCAAGCCATCAGCTTGCATCTCAGCCACTTGCTTGACTA
TCATGAGCAGCTATTGCTGAAATTTATCCATAAGGCAAAACCGCTTCCCCATAACAAGAGAGCCGAAGAAATATACCGCC
AGCGTGAACGGCTCGCGGCGACCTTTTACTCCGAAGGACAGCTGCCCGCTGAGTACCGGTTGTTCTCCTTAATTGGAGCG
ATCATCGATTACGGGGATCGGCTTGAGCATTTAGATAAGTTAATTGATAGCTTCCACCATTACCATTATGATGAGGAGCT
GACGAAACAGCTCGAAAAGTCAACAGGCGGCCGCTCATAG

Upstream 100 bases:

>100_bases
CCGATTTCGGCGGGGCGTTATATTTTCCCCTTGAACTCATAGATAAAAGTGTGTATAGTACAGAATGGTTTACCAAATCG
AAAAGGAGAGATTTCCATAG

Downstream 100 bases:

>100_bases
CGGGCCGCCTGTTTTAGCTTTTCATCCGTGGGTCAAGCGCATCGCGCAGCCCGTCACCCATTAAGTTAAAACCGAGCACG
GTTAACATAATCGCCAGTCC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKLGARIFKTGIAVTLALFLAALFHFPSPVFAGISAVFAMQPTIYRSYLSLIEQVQANVIGALFAITAVLILGRDPLIVG
LTLMIVIALCLKMRLESSTISVALVTVIAIMEYTERQFIEFAAIRFLTIMLGIFAAFLVNLIFLPPKYEKKLYEKISGET
ETILKWIRLHKQQVADHHHLKDEIETLLDEMTKLKHLYFMYKEERTYFRRQRFQKSRKLVLYRQMIAAADRALSVLKWLH
RLENELGRLPAELHQAISLHLSHLLDYHEQLLLKFIHKAKPLPHNKRAEEIYRQRERLAATFYSEGQLPAEYRLFSLIGA
IIDYGDRLEHLDKLIDSFHHYHYDEELTKQLEKSTGGRS

Sequences:

>Translated_359_residues
MKLGARIFKTGIAVTLALFLAALFHFPSPVFAGISAVFAMQPTIYRSYLSLIEQVQANVIGALFAITAVLILGRDPLIVG
LTLMIVIALCLKMRLESSTISVALVTVIAIMEYTERQFIEFAAIRFLTIMLGIFAAFLVNLIFLPPKYEKKLYEKISGET
ETILKWIRLHKQQVADHHHLKDEIETLLDEMTKLKHLYFMYKEERTYFRRQRFQKSRKLVLYRQMIAAADRALSVLKWLH
RLENELGRLPAELHQAISLHLSHLLDYHEQLLLKFIHKAKPLPHNKRAEEIYRQRERLAATFYSEGQLPAEYRLFSLIGA
IIDYGDRLEHLDKLIDSFHHYHYDEELTKQLEKSTGGRS
>Mature_359_residues
MKLGARIFKTGIAVTLALFLAALFHFPSPVFAGISAVFAMQPTIYRSYLSLIEQVQANVIGALFAITAVLILGRDPLIVG
LTLMIVIALCLKMRLESSTISVALVTVIAIMEYTERQFIEFAAIRFLTIMLGIFAAFLVNLIFLPPKYEKKLYEKISGET
ETILKWIRLHKQQVADHHHLKDEIETLLDEMTKLKHLYFMYKEERTYFRRQRFQKSRKLVLYRQMIAAADRALSVLKWLH
RLENELGRLPAELHQAISLHLSHLLDYHEQLLLKFIHKAKPLPHNKRAEEIYRQRERLAATFYSEGQLPAEYRLFSLIGA
IIDYGDRLEHLDKLIDSFHHYHYDEELTKQLEKSTGGRS

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0421 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343 [H]

Pfam domain/function: PF06081 DUF939 [H]

EC number: NA

Molecular weight: Translated: 41679; Mature: 41679

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGARIFKTGIAVTLALFLAALFHFPSPVFAGISAVFAMQPTIYRSYLSLIEQVQANVI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALFAITAVLILGRDPLIVGLTLMIVIALCLKMRLESSTISVALVTVIAIMEYTERQFIE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAAIRFLTIMLGIFAAFLVNLIFLPPKYEKKLYEKISGETETILKWIRLHKQQVADHHHL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KDEIETLLDEMTKLKHLYFMYKEERTYFRRQRFQKSRKLVLYRQMIAAADRALSVLKWLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLENELGRLPAELHQAISLHLSHLLDYHEQLLLKFIHKAKPLPHNKRAEEIYRQRERLAA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TFYSEGQLPAEYRLFSLIGAIIDYGDRLEHLDKLIDSFHHYHYDEELTKQLEKSTGGRS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLGARIFKTGIAVTLALFLAALFHFPSPVFAGISAVFAMQPTIYRSYLSLIEQVQANVI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALFAITAVLILGRDPLIVGLTLMIVIALCLKMRLESSTISVALVTVIAIMEYTERQFIE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAAIRFLTIMLGIFAAFLVNLIFLPPKYEKKLYEKISGETETILKWIRLHKQQVADHHHL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KDEIETLLDEMTKLKHLYFMYKEERTYFRRQRFQKSRKLVLYRQMIAAADRALSVLKWLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLENELGRLPAELHQAISLHLSHLLDYHEQLLLKFIHKAKPLPHNKRAEEIYRQRERLAA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TFYSEGQLPAEYRLFSLIGAIIDYGDRLEHLDKLIDSFHHYHYDEELTKQLEKSTGGRS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]