Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
---|---|
Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is sasP-B [H]
Identifier: 138894145
GI number: 138894145
Start: 526732
End: 526923
Strand: Direct
Name: sasP-B [H]
Synonym: GTNG_0471
Alternate gene names: 138894145
Gene position: 526732-526923 (Clockwise)
Preceding gene: 138894144
Following gene: 138894146
Centisome position: 14.84
GC content: 45.83
Gene sequence:
>192_bases ATGGCCAAACAACCGAACAAAACATCTGCTGGCACGAACATTCAAGAAGTAAGACAACAAAATGCACAATCGTCGCAAGC TGCTCAAGCTGGCCAATTCGGCACTGAGTTTGCGGCTGAGACGAATGTACAACATGTCAAACAACAAAATGCGCAAGCAG AAGCCCGCAAAGCACAAAACGCTAATCAGTAA
Upstream 100 bases:
>100_bases CAGACGATCATTGTTGATGGTGGAAGATCTTTACTTTTATAATGTCGGCGGATAGAACGGCCACCTCCGGGGCATAGTAA GGTACGTGGAGGTGAGAGCA
Downstream 100 bases:
>100_bases CCGATCATTATAAAGGCCGATGCCATCGAGCGCTAATGTCGGCGTATGTTGCCAAGAGAGCGCAGGCAAGAGGCCGGATA GGAAAGTCAAAAAGCGGAGG
Product: small, acid-soluble spore protein B
Products: NA
Alternate protein names: SASP [H]
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MAKQPNKTSAGTNIQEVRQQNAQSSQAAQAGQFGTEFAAETNVQHVKQQNAQAEARKAQNANQ
Sequences:
>Translated_63_residues MAKQPNKTSAGTNIQEVRQQNAQSSQAAQAGQFGTEFAAETNVQHVKQQNAQAEARKAQNANQ >Mature_62_residues AKQPNKTSAGTNIQEVRQQNAQSSQAAQAGQFGTEFAAETNVQHVKQQNAQAEARKAQNANQ
Specific function: SASP are proteins degraded in the first minutes of spore germination and provide amino acids for both new protein synthesis and metabolism. These proteins may be involved in dormant spore's high resistance to UV light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-type SASP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006341 [H]
Pfam domain/function: PF04259 SASP_gamma [H]
EC number: NA
Molecular weight: Translated: 6783; Mature: 6652
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQPNKTSAGTNIQEVRQQNAQSSQAAQAGQFGTEFAAETNVQHVKQQNAQAEARKAQN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ANQ CCC >Mature Secondary Structure AKQPNKTSAGTNIQEVRQQNAQSSQAAQAGQFGTEFAAETNVQHVKQQNAQAEARKAQN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ANQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2430935; 6767722; 6776116 [H]