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The map label for this gene is yrhD [H]

Identifier: 138894137

GI number: 138894137

Start: 517702

End: 518190

Strand: Reverse

Name: yrhD [H]

Synonym: GTNG_0463

Alternate gene names: 138894137

Gene position: 518190-517702 (Counterclockwise)

Preceding gene: 138894138

Following gene: 138894136

Centisome position: 14.6

GC content: 51.12

Gene sequence:

>489_bases
GTGGCTAAACCGATTACCACCATTCAAAAACATGAGATGACTGAAGAGGAAAAACGGGCCGAAGCGCTGGCGAAACTAAA
AGCGGCTGTCGGTGACAGTGAAGAAGCAGTTCACGAACTCCTCGAGTTCATCGAACAGCTGCACGAAAGCGGTTTGCTTG
AGGCAGCTAACGCTTTATTAAAAGCGCGGGAAGACGTAGCAAAAATCGTCGTCGGCCAGCTCAATCAAAAACCCGTAACA
ACGATGGTCAATCACGCGTTCGCCTTGGCCAGCCTCGCCTCTTCTCTTGATCCGGAACGGACAGCCAAACTGCTTGAACA
TATCGCCTCCGGTGCTATCGAGGCGTACGAACAGACCTCTGTCGAACCGACAAAAGTCGGGCTGTTCGACTTATTTAAGG
CGCTCAACGACCCGGATATCAACCGCGCCGTTCGATTTTTCCTTTCCGCACTTAAGGCGATCGGTCAACGTCTTGGAAAT
GATAGCTAA

Upstream 100 bases:

>100_bases
TTTCAAAAGCGGCATCCGCAAAACGGCGTCGAGGTCGAACGAAAATGGCGACGCCGCGATTACGTACCGCTCACGGAAGC
GGAAAAGGAGGTGAAAATCG

Downstream 100 bases:

>100_bases
CCAGTTGGTTAGCGGACAAAATAGCAGCAAGCAAATAGACTTTCAAAAAAATGGACAGCAATCCAAGCGACTAGCAAAAC
GAATGAGGCGTCCCGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAKPITTIQKHEMTEEEKRAEALAKLKAAVGDSEEAVHELLEFIEQLHESGLLEAANALLKAREDVAKIVVGQLNQKPVT
TMVNHAFALASLASSLDPERTAKLLEHIASGAIEAYEQTSVEPTKVGLFDLFKALNDPDINRAVRFFLSALKAIGQRLGN
DS

Sequences:

>Translated_162_residues
MAKPITTIQKHEMTEEEKRAEALAKLKAAVGDSEEAVHELLEFIEQLHESGLLEAANALLKAREDVAKIVVGQLNQKPVT
TMVNHAFALASLASSLDPERTAKLLEHIASGAIEAYEQTSVEPTKVGLFDLFKALNDPDINRAVRFFLSALKAIGQRLGN
DS
>Mature_161_residues
AKPITTIQKHEMTEEEKRAEALAKLKAAVGDSEEAVHELLEFIEQLHESGLLEAANALLKAREDVAKIVVGQLNQKPVTT
MVNHAFALASLASSLDPERTAKLLEHIASGAIEAYEQTSVEPTKVGLFDLFKALNDPDINRAVRFFLSALKAIGQRLGND
S

Specific function: Unknown

COG id: COG2427

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.fulgidus AF1717 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012440 [H]

Pfam domain/function: PF07849 DUF1641 [H]

EC number: NA

Molecular weight: Translated: 17658; Mature: 17527

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPITTIQKHEMTEEEKRAEALAKLKAAVGDSEEAVHELLEFIEQLHESGLLEAANALL
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
KAREDVAKIVVGQLNQKPVTTMVNHAFALASLASSLDPERTAKLLEHIASGAIEAYEQTS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
VEPTKVGLFDLFKALNDPDINRAVRFFLSALKAIGQRLGNDS
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKPITTIQKHEMTEEEKRAEALAKLKAAVGDSEEAVHELLEFIEQLHESGLLEAANALL
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
KAREDVAKIVVGQLNQKPVTTMVNHAFALASLASSLDPERTAKLLEHIASGAIEAYEQTS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
VEPTKVGLFDLFKALNDPDINRAVRFFLSALKAIGQRLGNDS
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]