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The map label for this gene is 138894108

Identifier: 138894108

GI number: 138894108

Start: 488151

End: 488939

Strand: Direct

Name: 138894108

Synonym: GTNG_0434

Alternate gene names: NA

Gene position: 488151-488939 (Clockwise)

Preceding gene: 138894107

Following gene: 138894111

Centisome position: 13.75

GC content: 41.32

Gene sequence:

>789_bases
TTGAACGTTGTCGGGTATATACGAGTCTCAACGCAAGGACAAGCAAGAGATGGTTACAGCTTGAAATATCAAGAAGAGGA
AATCAAAGCATATTGTGAGAAAAACGGCTGGAACTTGATCCATATTTTTAGAGATGAAGGCATTAGCGGGGCAAAAATGA
ATGAAGAAGCGTTCGAAGTAGACAGGGTGGGTTTACAGGAGATGTTGGCCCACCTTTCTTCTCTCCAAATTAAGTATGGC
GTGGTGTTAAACACAAGCCGGTTGTGGCGCTCTGACATGGTGAGAGTGTTGATTCATCGAGAGTTACAGAAGTATGGGGT
GGATATTAAAAGTATTGAACAGCCATCCTACAGTATCTACAAAAAAGACCCAAGCGATGTATTGGTCAATGGACTAATGG
AGTTATTAGACCAATATCAGCGATTGGAAATTGCTTTAAAACTAAAGAAAGGTCAGCATAAAAAAGCAAAAGAAGGAGGA
TATGCCGGAGGAAGGGTGATCTTTGGCTATACGAAACCAAAAGGGGAAAAGGAACTCAAGGTACATCATGAACAAGCTAA
AGTGGTCAAACGGGTCTTTGAACTAAAACGAAAACATCCTCAAGGGTCTTTAGCTCACATTGCCAGGGTGTTAAATGATG
AAGGGTACAAAACCGCTCAAGGAAAACCATTTACAAAAGTACAAGTAAAGCGAATTTTAGACCGAAAGAGCTTTTATCAA
GGGATGTATACCTACGGCCCCATACAAGCCCATGGCAAACACGAAGCCATTCTTTCAAACGTCACTTAA

Upstream 100 bases:

>100_bases
TATTTTTGTATTGTATTTTCACTAGAGACGGTCGTATAATACTCGTCATTATTAAAAAGCGTTACATAAATTGTAATTTT
TGTAACGGGAGGGCGACACA

Downstream 100 bases:

>100_bases
AAAATTCATGAGTTTTCTTATATATCGATATAGATGATGCCTCCATGGACAGGCTGATGTACCAATGCGCACCGGAAGGT
GAACGCTCGAACTAACGGAT

Product: resolvase family site-specific recombinase

Products: NA

Alternate protein names: Resolvase Domain; Resolvase Domain-Containing Protein; Recombinase; Site-Specific DNA Recombinase; Site-Specific Recombinase; Resolvase; DNA Integration/Recombination Protein; Cassette Chromosome Recombinase B; Site-Specific Recombinase Resolvase Family; LOW QUALITY PROTEIN Resolvase Domain Protein; Integrase; DNA Recombinase Truncation; DNA Integration/Recombination/Invertion Protein; Site-Specific Recombinase For Integration And Excision; Site-Specific Recombinases; Resolvase Family Site-Specific Recombinase; Resolvase-Like Protein; Resolvase/Recombinase Domain Protein; DNA Recombinase

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNVVGYIRVSTQGQARDGYSLKYQEEEIKAYCEKNGWNLIHIFRDEGISGAKMNEEAFEVDRVGLQEMLAHLSSLQIKYG
VVLNTSRLWRSDMVRVLIHRELQKYGVDIKSIEQPSYSIYKKDPSDVLVNGLMELLDQYQRLEIALKLKKGQHKKAKEGG
YAGGRVIFGYTKPKGEKELKVHHEQAKVVKRVFELKRKHPQGSLAHIARVLNDEGYKTAQGKPFTKVQVKRILDRKSFYQ
GMYTYGPIQAHGKHEAILSNVT

Sequences:

>Translated_262_residues
MNVVGYIRVSTQGQARDGYSLKYQEEEIKAYCEKNGWNLIHIFRDEGISGAKMNEEAFEVDRVGLQEMLAHLSSLQIKYG
VVLNTSRLWRSDMVRVLIHRELQKYGVDIKSIEQPSYSIYKKDPSDVLVNGLMELLDQYQRLEIALKLKKGQHKKAKEGG
YAGGRVIFGYTKPKGEKELKVHHEQAKVVKRVFELKRKHPQGSLAHIARVLNDEGYKTAQGKPFTKVQVKRILDRKSFYQ
GMYTYGPIQAHGKHEAILSNVT
>Mature_262_residues
MNVVGYIRVSTQGQARDGYSLKYQEEEIKAYCEKNGWNLIHIFRDEGISGAKMNEEAFEVDRVGLQEMLAHLSSLQIKYG
VVLNTSRLWRSDMVRVLIHRELQKYGVDIKSIEQPSYSIYKKDPSDVLVNGLMELLDQYQRLEIALKLKKGQHKKAKEGG
YAGGRVIFGYTKPKGEKELKVHHEQAKVVKRVFELKRKHPQGSLAHIARVLNDEGYKTAQGKPFTKVQVKRILDRKSFYQ
GMYTYGPIQAHGKHEAILSNVT

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30051; Mature: 30051

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVGYIRVSTQGQARDGYSLKYQEEEIKAYCEKNGWNLIHIFRDEGISGAKMNEEAFEV
CCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHH
DRVGLQEMLAHLSSLQIKYGVVLNTSRLWRSDMVRVLIHRELQKYGVDIKSIEQPSYSIY
HHHHHHHHHHHHHHCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEE
KKDPSDVLVNGLMELLDQYQRLEIALKLKKGQHKKAKEGGYAGGRVIFGYTKPKGEKELK
CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCCCCEEEEEECCCCCCHHHH
VHHEQAKVVKRVFELKRKHPQGSLAHIARVLNDEGYKTAQGKPFTKVQVKRILDRKSFYQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GMYTYGPIQAHGKHEAILSNVT
CCCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MNVVGYIRVSTQGQARDGYSLKYQEEEIKAYCEKNGWNLIHIFRDEGISGAKMNEEAFEV
CCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHH
DRVGLQEMLAHLSSLQIKYGVVLNTSRLWRSDMVRVLIHRELQKYGVDIKSIEQPSYSIY
HHHHHHHHHHHHHHCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEE
KKDPSDVLVNGLMELLDQYQRLEIALKLKKGQHKKAKEGGYAGGRVIFGYTKPKGEKELK
CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCCCCEEEEEECCCCCCHHHH
VHHEQAKVVKRVFELKRKHPQGSLAHIARVLNDEGYKTAQGKPFTKVQVKRILDRKSFYQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GMYTYGPIQAHGKHEAILSNVT
CCCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA