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The map label for this gene is yvcA [H]

Identifier: 138894083

GI number: 138894083

Start: 464420

End: 465085

Strand: Direct

Name: yvcA [H]

Synonym: GTNG_0409

Alternate gene names: 138894083

Gene position: 464420-465085 (Clockwise)

Preceding gene: 138894081

Following gene: 138894084

Centisome position: 13.08

GC content: 35.59

Gene sequence:

>666_bases
GTGGCCTTGAAAAGATATTGGCAAGCGTTATGGTTATCAGCACTTGTATTGATGGCAGGATGTCACATGGAGGAACAGAA
AGAACAGCCGAAGAAATGGCCGGACACGGTCGCGTTTCAGGATGAATTTACTCGTGAGTTTATGGCATCAACGAAAGAAG
TCAAAGAAGGGTACTATTTGTTTCAATCGCAAACAGATGGGTATACGATGTTATTTCCTAAAGACGCTGTAGTGGCAAAA
GGACTTTATGAAAGAGATGGAAAGGATTTCGAATCATTAGCTATCGGATGGGACAATGAGGAGGAAAATTTAGACTATTC
TATAGATCTTCAATATGAACAAGGTGAGTACATGGAGGATATTGAAACCAATTTATATTTATTATCCTCTCGGGCTTATG
CGGATTATAACGGTTCATATATGAAACAAGAATATAATGACAAAACTATTTATTTTGCCAAAAGCCAAAAAGACATTTCG
GTGGATGATAAACATGATACGGAATATTTGTTTTTTAGTTATATTAAATCAAACAATAGCCATCAAGGAGTTTTATTTAT
ATATTCAGTAAATTGCAATGATGCTAGGAAAAGTTGCCAAGTAAAGGTGGAGGAAGAAGAAAAAACAGCCAAAATGTTGA
TGAGGTCTATTACGTTTTATGATTAA

Upstream 100 bases:

>100_bases
TGTTTTTTATCTAAAAATGGGCCAAGTAGCATTTTTTATTGAAAAACGCACCATCATCTGATACGTATAGGGTAGTATGG
ATCAGAATGGAAAGGAATGG

Downstream 100 bases:

>100_bases
GGAAGGGATACGCTGTGTCGCAAAAACTTGTGTTAGATACGGATCTGTTGCGTGCGAGAATCATGGCGTTAGAATATGAT
CATTTGACGGAAGCAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MALKRYWQALWLSALVLMAGCHMEEQKEQPKKWPDTVAFQDEFTREFMASTKEVKEGYYLFQSQTDGYTMLFPKDAVVAK
GLYERDGKDFESLAIGWDNEEENLDYSIDLQYEQGEYMEDIETNLYLLSSRAYADYNGSYMKQEYNDKTIYFAKSQKDIS
VDDKHDTEYLFFSYIKSNNSHQGVLFIYSVNCNDARKSCQVKVEEEEKTAKMLMRSITFYD

Sequences:

>Translated_221_residues
MALKRYWQALWLSALVLMAGCHMEEQKEQPKKWPDTVAFQDEFTREFMASTKEVKEGYYLFQSQTDGYTMLFPKDAVVAK
GLYERDGKDFESLAIGWDNEEENLDYSIDLQYEQGEYMEDIETNLYLLSSRAYADYNGSYMKQEYNDKTIYFAKSQKDIS
VDDKHDTEYLFFSYIKSNNSHQGVLFIYSVNCNDARKSCQVKVEEEEKTAKMLMRSITFYD
>Mature_220_residues
ALKRYWQALWLSALVLMAGCHMEEQKEQPKKWPDTVAFQDEFTREFMASTKEVKEGYYLFQSQTDGYTMLFPKDAVVAKG
LYERDGKDFESLAIGWDNEEENLDYSIDLQYEQGEYMEDIETNLYLLSSRAYADYNGSYMKQEYNDKTIYFAKSQKDISV
DDKHDTEYLFFSYIKSNNSHQGVLFIYSVNCNDARKSCQVKVEEEEKTAKMLMRSITFYD

Specific function: Required for complex colony architecture [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004983 [H]

Pfam domain/function: PF03304 Mlp [H]

EC number: NA

Molecular weight: Translated: 26094; Mature: 25963

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKRYWQALWLSALVLMAGCHMEEQKEQPKKWPDTVAFQDEFTREFMASTKEVKEGYYL
CCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE
FQSQTDGYTMLFPKDAVVAKGLYERDGKDFESLAIGWDNEEENLDYSIDLQYEQGEYMED
EEECCCCEEEEECCHHHHHHHHHHCCCCCCHHEEECCCCCCCCCCEEEEEEECCCCHHHH
IETNLYLLSSRAYADYNGSYMKQEYNDKTIYFAKSQKDISVDDKHDTEYLFFSYIKSNNS
HCCCEEEEECCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC
HQGVLFIYSVNCNDARKSCQVKVEEEEKTAKMLMRSITFYD
CCCEEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALKRYWQALWLSALVLMAGCHMEEQKEQPKKWPDTVAFQDEFTREFMASTKEVKEGYYL
CHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE
FQSQTDGYTMLFPKDAVVAKGLYERDGKDFESLAIGWDNEEENLDYSIDLQYEQGEYMED
EEECCCCEEEEECCHHHHHHHHHHCCCCCCHHEEECCCCCCCCCCEEEEEEECCCCHHHH
IETNLYLLSSRAYADYNGSYMKQEYNDKTIYFAKSQKDISVDDKHDTEYLFFSYIKSNNS
HCCCEEEEECCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCC
HQGVLFIYSVNCNDARKSCQVKVEEEEKTAKMLMRSITFYD
CCCEEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]