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The map label for this gene is yizB [H]

Identifier: 138893981

GI number: 138893981

Start: 348394

End: 348717

Strand: Direct

Name: yizB [H]

Synonym: GTNG_0307

Alternate gene names: 138893981

Gene position: 348394-348717 (Clockwise)

Preceding gene: 138893979

Following gene: 138893982

Centisome position: 9.81

GC content: 37.65

Gene sequence:

>324_bases
ATGAACACGCAGTTTAAAAAAGGAGTATTAGAGCTATGTGTACTTGCACTATTGAATAAGCAGGATCGTTACGGTTATGA
GATCGTTCAAAAAATTTCGGAGCAAATGGTTATTTCAGAAGGATCGGTATATCCCTTATTAAGGAGACTGAAAAAAGAGG
ATTATTTGACAACGTATTTGCAGGAGTCGAATGAAGGTCCTCCTCGAAAATATTACAAGCTCACGGAAAAAGGGAGAAAC
CATCTTCGGAATCTTCATGAAGAGTGGATGCAATTTTCTGAAGGGGTCAATCAAATCATAAAGGACGGTGGATTACATGA
ATAA

Upstream 100 bases:

>100_bases
CTTGTAATAAACAATACTGTATGGTATATTGTTTGTTGAAAGGGATTTGTTTATCACAGTACTGTGCAATAAATAGTAGT
GAGAGTGAGGTAACACCCCA

Downstream 100 bases:

>100_bases
ACAACAATTTCTAACGGCTCTTGAAACGGAGTTGAAAAAGCTTCCTCACGAAGAACGTGAAGAAATTATACAAGATTTTG
AAGAGCATTTTTACATTGGA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNTQFKKGVLELCVLALLNKQDRYGYEIVQKISEQMVISEGSVYPLLRRLKKEDYLTTYLQESNEGPPRKYYKLTEKGRN
HLRNLHEEWMQFSEGVNQIIKDGGLHE

Sequences:

>Translated_107_residues
MNTQFKKGVLELCVLALLNKQDRYGYEIVQKISEQMVISEGSVYPLLRRLKKEDYLTTYLQESNEGPPRKYYKLTEKGRN
HLRNLHEEWMQFSEGVNQIIKDGGLHE
>Mature_107_residues
MNTQFKKGVLELCVLALLNKQDRYGYEIVQKISEQMVISEGSVYPLLRRLKKEDYLTTYLQESNEGPPRKYYKLTEKGRN
HLRNLHEEWMQFSEGVNQIIKDGGLHE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12648; Mature: 12648

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQFKKGVLELCVLALLNKQDRYGYEIVQKISEQMVISEGSVYPLLRRLKKEDYLTTYL
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
QESNEGPPRKYYKLTEKGRNHLRNLHEEWMQFSEGVNQIIKDGGLHE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNTQFKKGVLELCVLALLNKQDRYGYEIVQKISEQMVISEGSVYPLLRRLKKEDYLTTYL
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
QESNEGPPRKYYKLTEKGRNHLRNLHEEWMQFSEGVNQIIKDGGLHE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]