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The map label for this gene is pcrB

Identifier: 138893930

GI number: 138893930

Start: 283144

End: 283863

Strand: Direct

Name: pcrB

Synonym: GTNG_0254

Alternate gene names: 138893930

Gene position: 283144-283863 (Clockwise)

Preceding gene: 138893929

Following gene: 138893931

Centisome position: 7.98

GC content: 52.78

Gene sequence:

>720_bases
ATGGAAGAGATTCGCGCTTGGCGCCATGTGTTTAAACTAGACCCGAACAAGCCGATCGATGATGAGCGCCTTGAGCGCCT
TTGTGAGTCTGGAACGGATGCTGTCATCGTTGGTGGAACGGATGGGGTGACGCTTGATGGTGTGCTCGATTTATTGGCTC
GCATCCGTCGCTTCTCGGTGCCATGCGCGCTCGAAGTGACCGATATAGAAGCGTTGACGCCGGGATTTGATGCGTATCTC
ATCCCGATGGTGTTAAACAGTTGCCGTGTCGATTGGGTGATCGGCCGTCATCATGAGGCGGTGAAACAGTATGGCGATGT
CATGAACTGGGATGAGATTTTCGCTGAGGGCTATTGCATTTTAAATGGAGAATGCAAAGCGGCAAAGCTGACAGAGGCTA
ATACAGCGCTTGATGACGATGATGTCGTGGCGTATGCTCGCCTCGCTGAGCATCTGTATAAGCTGCCGATCTTTTATCTT
GAATATAGCGGTACGTACGGCAATCCGTCGTTAGTGGAAAAAGTGAAACGGGCGCTCAGCCGAACACAGCTCGTGTACGG
CGGCGGCATCATGACGCCAGAACAAGCGGCCGAAATGGCTCGCTATGCCGATACGGTCGTCGTCGGCAACGCCGTTTACG
ATTCGTTTGAAAGCGCGTTGGCAACGGTGGAGGCGGTTAAGCGGATCGATGGCGAAAATGAGATCAGTGGTGTAAAATAG

Upstream 100 bases:

>100_bases
GGTGCTGCAAGGAGATTCCTTCCATCGGAAAAGGAACTCCTTTTCTTTTTGCGGATTTGTTATAATGGAACAATGGAGTA
ATGAGTGGAGGGATATTGTC

Downstream 100 bases:

>100_bases
AACATATGTTTTATTGGTGGTGGAAACGATGAATTTTTTATCTGAAAAGTTGCTCGCTCATTTAAACAAGGAGCAGCAGG
AGGCGGTCAAAACGACGGAA

Product: geranylgeranylglyceryl phosphate synthase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MEEIRAWRHVFKLDPNKPIDDERLERLCESGTDAVIVGGTDGVTLDGVLDLLARIRRFSVPCALEVTDIEALTPGFDAYL
IPMVLNSCRVDWVIGRHHEAVKQYGDVMNWDEIFAEGYCILNGECKAAKLTEANTALDDDDVVAYARLAEHLYKLPIFYL
EYSGTYGNPSLVEKVKRALSRTQLVYGGGIMTPEQAAEMARYADTVVVGNAVYDSFESALATVEAVKRIDGENEISGVK

Sequences:

>Translated_239_residues
MEEIRAWRHVFKLDPNKPIDDERLERLCESGTDAVIVGGTDGVTLDGVLDLLARIRRFSVPCALEVTDIEALTPGFDAYL
IPMVLNSCRVDWVIGRHHEAVKQYGDVMNWDEIFAEGYCILNGECKAAKLTEANTALDDDDVVAYARLAEHLYKLPIFYL
EYSGTYGNPSLVEKVKRALSRTQLVYGGGIMTPEQAAEMARYADTVVVGNAVYDSFESALATVEAVKRIDGENEISGVK
>Mature_239_residues
MEEIRAWRHVFKLDPNKPIDDERLERLCESGTDAVIVGGTDGVTLDGVLDLLARIRRFSVPCALEVTDIEALTPGFDAYL
IPMVLNSCRVDWVIGRHHEAVKQYGDVMNWDEIFAEGYCILNGECKAAKLTEANTALDDDDVVAYARLAEHLYKLPIFYL
EYSGTYGNPSLVEKVKRALSRTQLVYGGGIMTPEQAAEMARYADTVVVGNAVYDSFESALATVEAVKRIDGENEISGVK

Specific function: Probable prenyltransferase that may catalyze the transfer of a prenyl moiety to sn-glycerol-1-phosphate (G1P)

COG id: COG1646

COG function: function code R; Predicted phosphate-binding enzymes, TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GGGP synthase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCRB_GEOTN (A4IJY4)

Other databases:

- EMBL:   CP000557
- RefSeq:   YP_001124383.1
- ProteinModelPortal:   A4IJY4
- SMR:   A4IJY4
- STRING:   A4IJY4
- GeneID:   4965107
- GenomeReviews:   CP000557_GR
- KEGG:   gtn:GTNG_0254
- NMPDR:   fig|420246.5.peg.252
- eggNOG:   COG1646
- HOGENOM:   HBG313841
- OMA:   AKEMAQY
- ProtClustDB:   PRK04169
- BioCyc:   GTHE420246:GTNG_0254-MONOMER
- HAMAP:   MF_00112
- InterPro:   IPR008205
- Gene3D:   G3DSA:3.20.20.390
- TIGRFAMs:   TIGR01768

Pfam domain/function: PF01884 PcrB

EC number: NA

Molecular weight: Translated: 26485; Mature: 26485

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: BINDING 12-12 BINDING 164-164 BINDING 189-189 BINDING 210-210

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIRAWRHVFKLDPNKPIDDERLERLCESGTDAVIVGGTDGVTLDGVLDLLARIRRFSV
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC
PCALEVTDIEALTPGFDAYLIPMVLNSCRVDWVIGRHHEAVKQYGDVMNWDEIFAEGYCI
CCEEEECCHHHHCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCHHHHHHCCEEE
LNGECKAAKLTEANTALDDDDVVAYARLAEHLYKLPIFYLEYSGTYGNPSLVEKVKRALS
ECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHH
RTQLVYGGGIMTPEQAAEMARYADTVVVGNAVYDSFESALATVEAVKRIDGENEISGVK
HHEEEECCCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEEIRAWRHVFKLDPNKPIDDERLERLCESGTDAVIVGGTDGVTLDGVLDLLARIRRFSV
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC
PCALEVTDIEALTPGFDAYLIPMVLNSCRVDWVIGRHHEAVKQYGDVMNWDEIFAEGYCI
CCEEEECCHHHHCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCHHHHHHCCEEE
LNGECKAAKLTEANTALDDDDVVAYARLAEHLYKLPIFYLEYSGTYGNPSLVEKVKRALS
ECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHH
RTQLVYGGGIMTPEQAAEMARYADTVVVGNAVYDSFESALATVEAVKRIDGENEISGVK
HHEEEECCCCCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA