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The map label for this gene is tnpA [H]

Identifier: 138893908

GI number: 138893908

Start: 254415

End: 255632

Strand: Direct

Name: tnpA [H]

Synonym: GTNG_0232

Alternate gene names: 138893908

Gene position: 254415-255632 (Clockwise)

Preceding gene: 138893907

Following gene: 138893909

Centisome position: 7.17

GC content: 45.98

Gene sequence:

>1218_bases
ATGGTAAAGGTGACCAAACCAAACCATTGGAGGAAAATTCGCATGTACTCTCAGTTTATCAAAGAACTTATCGATTTGCC
AGATGTTTTGATTGAAAAGGAACGAAAAGAAGGAGAACGCTGGATTTTCGAACTTTCTCTTCCCGAACAATGTCCGTTAT
GTCCTGTCTGCTTGCAACGCACAACAAAAATGACCCGAAAAAAGAAGCAATGGATGCATGGCTATGCCCAACGGATCGGG
GTTTTTTGGATTGAACTCCCAGTGGAACGGAGACGTTGTTGCACTTGTGGCATGACATTCAGCACCTCTTATCCAGGGAT
CTCCCCTCGAAGTGTGGCAACGGACGTCTTTCAACAATGGGTGGCGCAATCTTGCATTGGAACATCCATTCAGGCGGTGG
CTCGTATGCTAAAACTCCCTTACACGACTGTTGAACGTTGGTTTTATACCCATGCCCCTTCCTTTTTGTCGAATACCATT
CAGCCAAAGGCGGTTTGTGTCGATGAGTTTGCTTTTCGAAAAGGGCATGACTATGGAGTGGCGGTCATGGATGCAGAGAC
GGGAGAAGTGTATTCCATCGAAGCAGGAAAGAATGAGGCAGCCATTCGAAGTGCATTGACGTGTGTGTCTTCTTCTGTCC
AGTGTGTCGTGAGCGATTTGGCTCCGGCCATGAAAAAAGCCATTCAAGGGGCGTGTCCAGAAGCGGTACATGTGGTCGAT
TATTTTCATGTCATTCAGCTGTTTACGGAAGCCTTGGATCGGTGTCGCAAATATTTAGCCAAAGGGGGCAAGAAACACGG
AAATGTTCGGTACGTTTGTTGTTTATTGAGCCAATGCCCAGAGAAATTAACCGAGGAGGAACGTCAAACGGTACGGGAGT
GGTGTAAAGAAAGCGATTACCTACAGGTTGTTTATCAATCCCTCCAACATTTTCGCTATGTATCCAAAAGCCAAGGCGAA
CGACAGGCGAAACGTCGCTTGGAAGCTTGGATTCATCGGTATTTGTTTTGTACTTGTTCTGTTGTGCGTGCCATCGCAAA
AGCACTCGCAAAACGAACAGAAGAAATCATTTCGTGCATTTTGTCGCCTTATTCGAATGGGAAAATGGAAGGGACGAATA
ACAAGATCAAGCTGATCAAACGCCGAGGGTATGGATACAGAAATATCCAAAGATTTGCATTGCGAGTTCGGCTAGAAACG
GCTACCACACTTCAATGA

Upstream 100 bases:

>100_bases
ATTAAAGGCTCTTCACCACAAGTTGTACTTGATATATTGACATAGAACGCAGTAGGAAAATAAAGAAAATAGAGGGTACA
AAAAATGCGAATTTTCCTGT

Downstream 100 bases:

>100_bases
TAGATGCAAGTACATCTTTTGGTGATGAACCTAATTAAAAAAATTTATCCAAATTATTGAATGTGAGCATTGATTATCTG
CTTGATGATGGAGAGACTTT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MVKVTKPNHWRKIRMYSQFIKELIDLPDVLIEKERKEGERWIFELSLPEQCPLCPVCLQRTTKMTRKKKQWMHGYAQRIG
VFWIELPVERRRCCTCGMTFSTSYPGISPRSVATDVFQQWVAQSCIGTSIQAVARMLKLPYTTVERWFYTHAPSFLSNTI
QPKAVCVDEFAFRKGHDYGVAVMDAETGEVYSIEAGKNEAAIRSALTCVSSSVQCVVSDLAPAMKKAIQGACPEAVHVVD
YFHVIQLFTEALDRCRKYLAKGGKKHGNVRYVCCLLSQCPEKLTEEERQTVREWCKESDYLQVVYQSLQHFRYVSKSQGE
RQAKRRLEAWIHRYLFCTCSVVRAIAKALAKRTEEIISCILSPYSNGKMEGTNNKIKLIKRRGYGYRNIQRFALRVRLET
ATTLQ

Sequences:

>Translated_405_residues
MVKVTKPNHWRKIRMYSQFIKELIDLPDVLIEKERKEGERWIFELSLPEQCPLCPVCLQRTTKMTRKKKQWMHGYAQRIG
VFWIELPVERRRCCTCGMTFSTSYPGISPRSVATDVFQQWVAQSCIGTSIQAVARMLKLPYTTVERWFYTHAPSFLSNTI
QPKAVCVDEFAFRKGHDYGVAVMDAETGEVYSIEAGKNEAAIRSALTCVSSSVQCVVSDLAPAMKKAIQGACPEAVHVVD
YFHVIQLFTEALDRCRKYLAKGGKKHGNVRYVCCLLSQCPEKLTEEERQTVREWCKESDYLQVVYQSLQHFRYVSKSQGE
RQAKRRLEAWIHRYLFCTCSVVRAIAKALAKRTEEIISCILSPYSNGKMEGTNNKIKLIKRRGYGYRNIQRFALRVRLET
ATTLQ
>Mature_405_residues
MVKVTKPNHWRKIRMYSQFIKELIDLPDVLIEKERKEGERWIFELSLPEQCPLCPVCLQRTTKMTRKKKQWMHGYAQRIG
VFWIELPVERRRCCTCGMTFSTSYPGISPRSVATDVFQQWVAQSCIGTSIQAVARMLKLPYTTVERWFYTHAPSFLSNTI
QPKAVCVDEFAFRKGHDYGVAVMDAETGEVYSIEAGKNEAAIRSALTCVSSSVQCVVSDLAPAMKKAIQGACPEAVHVVD
YFHVIQLFTEALDRCRKYLAKGGKKHGNVRYVCCLLSQCPEKLTEEERQTVREWCKESDYLQVVYQSLQHFRYVSKSQGE
RQAKRRLEAWIHRYLFCTCSVVRAIAKALAKRTEEIISCILSPYSNGKMEGTNNKIKLIKRRGYGYRNIQRFALRVRLET
ATTLQ

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46705; Mature: 46705

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVTKPNHWRKIRMYSQFIKELIDLPDVLIEKERKEGERWIFELSLPEQCPLCPVCLQR
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH
TTKMTRKKKQWMHGYAQRIGVFWIELPVERRRCCTCGMTFSTSYPGISPRSVATDVFQQW
HHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHH
VAQSCIGTSIQAVARMLKLPYTTVERWFYTHAPSFLSNTIQPKAVCVDEFAFRKGHDYGV
HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCE
AVMDAETGEVYSIEAGKNEAAIRSALTCVSSSVQCVVSDLAPAMKKAIQGACPEAVHVVD
EEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YFHVIQLFTEALDRCRKYLAKGGKKHGNVRYVCCLLSQCPEKLTEEERQTVREWCKESDY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LQVVYQSLQHFRYVSKSQGERQAKRRLEAWIHRYLFCTCSVVRAIAKALAKRTEEIISCI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSPYSNGKMEGTNNKIKLIKRRGYGYRNIQRFALRVRLETATTLQ
HCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEECHHCCCC
>Mature Secondary Structure
MVKVTKPNHWRKIRMYSQFIKELIDLPDVLIEKERKEGERWIFELSLPEQCPLCPVCLQR
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH
TTKMTRKKKQWMHGYAQRIGVFWIELPVERRRCCTCGMTFSTSYPGISPRSVATDVFQQW
HHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHH
VAQSCIGTSIQAVARMLKLPYTTVERWFYTHAPSFLSNTIQPKAVCVDEFAFRKGHDYGV
HHHHHHCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCE
AVMDAETGEVYSIEAGKNEAAIRSALTCVSSSVQCVVSDLAPAMKKAIQGACPEAVHVVD
EEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YFHVIQLFTEALDRCRKYLAKGGKKHGNVRYVCCLLSQCPEKLTEEERQTVREWCKESDY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LQVVYQSLQHFRYVSKSQGERQAKRRLEAWIHRYLFCTCSVVRAIAKALAKRTEEIISCI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSPYSNGKMEGTNNKIKLIKRRGYGYRNIQRFALRVRLETATTLQ
HCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]