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The map label for this gene is ydiL [H]

Identifier: 138893897

GI number: 138893897

Start: 238787

End: 239479

Strand: Reverse

Name: ydiL [H]

Synonym: GTNG_0221

Alternate gene names: 138893897

Gene position: 239479-238787 (Counterclockwise)

Preceding gene: 138893900

Following gene: 138893896

Centisome position: 6.75

GC content: 49.35

Gene sequence:

>693_bases
ATGCAGCTATCCTCCTTTATCGGTGTGCCGCTTCTGCATGCTCTCGGCATCGGCCAAAGCGCAAAAAGCCCTATCGAAGC
CGCCAAGATTGCTTCCGGGTATTGGGCGGTCATCAGCTTTCTAGCGGCTTTAATCATCATTTTATGGCTGCTTCGCGGCG
TCCGCGATGAACGAGGGATGCGACAGCTTCCCCTCGCTTCGTCATCGATGTGGGCAATCTCTGGCGTCTTTTTGGCACTT
ATCGCCCAAAGCATCGCCGCCAATATTGAATGGCGGTTGCTCGGCATTGAACCGGGTTCGGAAAACACAAGGCAAATCAT
TGATATCATCCGCTTGACGCCGCTATTAGTCATCGTTGCTTCTATTATCGGCCCGATTTTGGAAGAGATTGTTTTTCGCA
AAATCATTTTTGGCTCTCTTTATGAAAAATATCACTTTTGGCCGGCCGCGCTCGTGAGCTCGCTTCTTTTTGCCATTGCC
CATATGGAACCGGAACATTTGCTGTTGTATACGGCAATGGGACTGACGTTCGCCTTTTTATATGCGAAAACCGGCCGCAT
TTTAGTGCCGATTTTCGCCCATGTGACGATGAATACGTTTGTGATCGTAGTTCAAATCTTGTTGGCTGATGAGTTAGAAA
AAATGATGCGCCAAGCTGGACTGCCGCTAGCGCTTTGGAGGTTGTGGCTATGA

Upstream 100 bases:

>100_bases
TCATTTCACCAAACATGTGTTACAATACGGATATATTTGAATAAAGGGCCAAGAGGATTTGAAACGCCATTACTGGTATG
TCATCATCACATACATCGCC

Downstream 100 bases:

>100_bases
CGAGCTGGCCGCGGCTGTTTTCACTGCCGTATTTCATCCTAGGTGTATTGTTTACGTATTTGGCGATCAAAAGCGCTCAT
GAAACGGTTTGGAACGTTTC

Product: CAAX amino terminal protease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MQLSSFIGVPLLHALGIGQSAKSPIEAAKIASGYWAVISFLAALIIILWLLRGVRDERGMRQLPLASSSMWAISGVFLAL
IAQSIAANIEWRLLGIEPGSENTRQIIDIIRLTPLLVIVASIIGPILEEIVFRKIIFGSLYEKYHFWPAALVSSLLFAIA
HMEPEHLLLYTAMGLTFAFLYAKTGRILVPIFAHVTMNTFVIVVQILLADELEKMMRQAGLPLALWRLWL

Sequences:

>Translated_230_residues
MQLSSFIGVPLLHALGIGQSAKSPIEAAKIASGYWAVISFLAALIIILWLLRGVRDERGMRQLPLASSSMWAISGVFLAL
IAQSIAANIEWRLLGIEPGSENTRQIIDIIRLTPLLVIVASIIGPILEEIVFRKIIFGSLYEKYHFWPAALVSSLLFAIA
HMEPEHLLLYTAMGLTFAFLYAKTGRILVPIFAHVTMNTFVIVVQILLADELEKMMRQAGLPLALWRLWL
>Mature_230_residues
MQLSSFIGVPLLHALGIGQSAKSPIEAAKIASGYWAVISFLAALIIILWLLRGVRDERGMRQLPLASSSMWAISGVFLAL
IAQSIAANIEWRLLGIEPGSENTRQIIDIIRLTPLLVIVASIIGPILEEIVFRKIIFGSLYEKYHFWPAALVSSLLFAIA
HMEPEHLLLYTAMGLTFAFLYAKTGRILVPIFAHVTMNTFVIVVQILLADELEKMMRQAGLPLALWRLWL

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U48 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003675 [H]

Pfam domain/function: PF02517 Abi [H]

EC number: NA

Molecular weight: Translated: 25589; Mature: 25589

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSSFIGVPLLHALGIGQSAKSPIEAAKIASGYWAVISFLAALIIILWLLRGVRDERGM
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RQLPLASSSMWAISGVFLALIAQSIAANIEWRLLGIEPGSENTRQIIDIIRLTPLLVIVA
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
SIIGPILEEIVFRKIIFGSLYEKYHFWPAALVSSLLFAIAHMEPEHLLLYTAMGLTFAFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YAKTGRILVPIFAHVTMNTFVIVVQILLADELEKMMRQAGLPLALWRLWL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MQLSSFIGVPLLHALGIGQSAKSPIEAAKIASGYWAVISFLAALIIILWLLRGVRDERGM
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RQLPLASSSMWAISGVFLALIAQSIAANIEWRLLGIEPGSENTRQIIDIIRLTPLLVIVA
HHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
SIIGPILEEIVFRKIIFGSLYEKYHFWPAALVSSLLFAIAHMEPEHLLLYTAMGLTFAFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YAKTGRILVPIFAHVTMNTFVIVVQILLADELEKMMRQAGLPLALWRLWL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]