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The map label for this gene is rex [H]

Identifier: 138893893

GI number: 138893893

Start: 236975

End: 237616

Strand: Direct

Name: rex [H]

Synonym: GTNG_0217

Alternate gene names: 138893893

Gene position: 236975-237616 (Clockwise)

Preceding gene: 138893892

Following gene: 138893894

Centisome position: 6.67

GC content: 48.6

Gene sequence:

>642_bases
ATGAGTAACGAACAACCGAAAATTCCGCAAGCAACCGCGAAGCGGCTGCCGCTGTACTACCGGTTTTTGAAGAATTTGCA
TGCGTCAGGAAAACAGCGTGTGTCCTCCGCCGAATTAAGCGAGGCGGTCAAAGTCGATCCGGCGACCATCCGCCGCGATT
TCTCGTATTTTGGCGCGCTCGGCAAAAAAGGGTATGGGTATAATGTCAATTATTTGTTGTCATTTTTCCGTCGGACGCTT
GAAGAGGATGAAGTGACGGAAGTCGCCTTGTTCGGTGTCGGAAATTTAGGTACGGCCTTTTTAAACTACAATTTTTCCAA
AAACAACAATACAAAAATCGTGATGGCGTTTGATGTTGATGAACAGAAAGTGGGGACGACCGTCGGCGGCGTGCCGGTTT
ACCATCTCGATGAACTTGAGGAGCGGCTTTGCGGAAACATTCCGGTCGCCATTTTAACTGTGCCAGCCGTCGCGGCTCAA
GCGCTGACTGACCGCCTTGTCACCCAAGGGATTAAAGGCATTTTAAACTTCACTCCGGCACGGCTGAATGTGCCGAAACA
TATTCGCGTTCATCATATCGATTTAGCCATTGAATTGCAGTCGCTCGTCTACTTTCTGAGAAACTATCCATTGCCATCAT
AA

Upstream 100 bases:

>100_bases
TGATAAAGGGATGATCATCGGTCCGACGTATTTGGTCGAGAAAACGGGCGGAAAGTCCGGCCATTATCGACGGAAAACCG
ATTAGCTGGGGGATGAAATG

Downstream 100 bases:

>100_bases
AGGAGAGAATAAAGCGTGAAATACATTTTGATTGTCCTTGTGATTTTGTTGCTGTTTGGCACGAAAAAATTGCCGGAGCT
AGGACGGTCGGTCGGCCAGT

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSNEQPKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSEAVKVDPATIRRDFSYFGALGKKGYGYNVNYLLSFFRRTL
EEDEVTEVALFGVGNLGTAFLNYNFSKNNNTKIVMAFDVDEQKVGTTVGGVPVYHLDELEERLCGNIPVAILTVPAVAAQ
ALTDRLVTQGIKGILNFTPARLNVPKHIRVHHIDLAIELQSLVYFLRNYPLPS

Sequences:

>Translated_213_residues
MSNEQPKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSEAVKVDPATIRRDFSYFGALGKKGYGYNVNYLLSFFRRTL
EEDEVTEVALFGVGNLGTAFLNYNFSKNNNTKIVMAFDVDEQKVGTTVGGVPVYHLDELEERLCGNIPVAILTVPAVAAQ
ALTDRLVTQGIKGILNFTPARLNVPKHIRVHHIDLAIELQSLVYFLRNYPLPS
>Mature_212_residues
SNEQPKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSEAVKVDPATIRRDFSYFGALGKKGYGYNVNYLLSFFRRTLE
EDEVTEVALFGVGNLGTAFLNYNFSKNNNTKIVMAFDVDEQKVGTTVGGVPVYHLDELEERLCGNIPVAILTVPAVAAQA
LTDRLVTQGIKGILNFTPARLNVPKHIRVHHIDLAIELQSLVYFLRNYPLPS

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state [H]

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N [H]

EC number: NA

Molecular weight: Translated: 23800; Mature: 23668

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEQPKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSEAVKVDPATIRRDFSYFGAL
CCCCCCCCCHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GKKGYGYNVNYLLSFFRRTLEEDEVTEVALFGVGNLGTAFLNYNFSKNNNTKIVMAFDVD
CCCCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECC
EQKVGTTVGGVPVYHLDELEERLCGNIPVAILTVPAVAAQALTDRLVTQGIKGILNFTPA
CHHHCCEECCCCEEHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RLNVPKHIRVHHIDLAIELQSLVYFLRNYPLPS
CCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SNEQPKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSEAVKVDPATIRRDFSYFGAL
CCCCCCCCHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GKKGYGYNVNYLLSFFRRTLEEDEVTEVALFGVGNLGTAFLNYNFSKNNNTKIVMAFDVD
CCCCCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECC
EQKVGTTVGGVPVYHLDELEERLCGNIPVAILTVPAVAAQALTDRLVTQGIKGILNFTPA
CHHHCCEECCCCEEHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RLNVPKHIRVHHIDLAIELQSLVYFLRNYPLPS
CCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA