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The map label for this gene is ybbR [H]

Identifier: 138893829

GI number: 138893829

Start: 160805

End: 162085

Strand: Direct

Name: ybbR [H]

Synonym: GTNG_0150

Alternate gene names: 138893829

Gene position: 160805-162085 (Clockwise)

Preceding gene: 138893828

Following gene: 138893830

Centisome position: 4.53

GC content: 48.4

Gene sequence:

>1281_bases
ATGGATAAATTAATGGACCACCCTTGGTTTATTCGCGTTGTTTCTTTATTATTGGCCATCATGCTGTATATGTCGGCCAA
TGTCGGGGCGAAAACCGGGGAGCAGACGCGCAATACATTTGGCCAGGAAGATACGGAAACATTGATCGATGTCCCGGTTG
TTGCTTATTATGATGAGGAGAACTTGATCGTATCTGGCGTGCCGCAATATGTAAATGTCACGCTTCAAGGTCCGGCAAGC
ATTGTCAAACCAACGGCGCTGCAACGGAATTTCGAAGTGTACGTCGATTTAACGGATTTGCCGTTAGGTACGTATACGGT
ACCGATCAAATACAAGGACGTTTCCGAGAAATTGAAAGTGAACATTCAGCCCGCTTCGGTGAAAGTGACGATCCGCGAAA
AAGTATCGAAACGCTTCCCTGTCAGCGTCGAGTTTTTTAACCGAAACAAAATGCCTGATGGCTATTCTGTCGGCGAACCG
ACCGTTGAGCCGGGCACTGTGACGATTACTGGATCGAAAGAGCTGATCGATGATATTTCGTTTGTAAAAGCGATCGTCGA
CCTGGAAGGGGCGACGGAAACGTTGGCGAAAAAAGTGCGAGTTCGGGTATACGATCGCCAAGGCAATGAAATCGATGTTG
AGCCGCAGCCATCAGTTGTGGAAGTGACTGTGCCGGTCAAAAGTGCTAGCAAGACTGTGCCACTTCAAGTACAAACAACT
GGGGAGCTGCCGGATGGGGTGCGTCTTGTTAGCATCCATCCAGAACCGGAGCAGGTGACGATTTACGGATCAAAAGGCGC
ATTGGACCGGATTAAACAACTCGATGGGCTGACGGTTGATTTAGATAATGTGAAGGATGATACGACAGTAGAGCTTGATG
TTCCACTTCCTGACGGGGTGAAAAGAATTGACCCGTCCAAAATCAAGGTCCACATCAATGTTGAAAAGGTGGAGAAGGCT
GAGAACGAAGAGAATAAGGTTGAGAAAGATGAGGTACGTACATGGGAAAATATTCCAATTAATGTTGTCGGCCTATCGGA
TTCGTACCAGGCTGACTTTTTGGAGCCTGTAGGCGGAAAGATTAACGTCCGTCTCATCGGCCCACCTGATATCGTCCGTG
GTCTGACGAAAGACGACGTTCGTCTCTATGTCGATGTCAGCGGGCTTGATGCGGGTGAGCACCGAGTCACCATTCGATGG
GACAAACCGGAACAAGTCCGATGGGAGCCATCGGCAGAAACAGCGATGGTCAATATTAGTGAAAAAGCAGCTGCACAATA
A

Upstream 100 bases:

>100_bases
GATTTAACGATCGATGAATTCCGGGAACTGTTAACAGGCGAGCTGGCTCCAGCTGTGAAGACCGCCACTTCTTCCCGTTG
GCAATGGAGGGGGAAGAAAC

Downstream 100 bases:

>100_bases
ATTGTACAGTAAGGAGAGATTGACCGAATGGGTAAATATTTTGGCACTGACGGTGTACGTGGAGTAGCGAATCGTGAGCT
GACGCCGGAATTGGCGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MDKLMDHPWFIRVVSLLLAIMLYMSANVGAKTGEQTRNTFGQEDTETLIDVPVVAYYDEENLIVSGVPQYVNVTLQGPAS
IVKPTALQRNFEVYVDLTDLPLGTYTVPIKYKDVSEKLKVNIQPASVKVTIREKVSKRFPVSVEFFNRNKMPDGYSVGEP
TVEPGTVTITGSKELIDDISFVKAIVDLEGATETLAKKVRVRVYDRQGNEIDVEPQPSVVEVTVPVKSASKTVPLQVQTT
GELPDGVRLVSIHPEPEQVTIYGSKGALDRIKQLDGLTVDLDNVKDDTTVELDVPLPDGVKRIDPSKIKVHINVEKVEKA
ENEENKVEKDEVRTWENIPINVVGLSDSYQADFLEPVGGKINVRLIGPPDIVRGLTKDDVRLYVDVSGLDAGEHRVTIRW
DKPEQVRWEPSAETAMVNISEKAAAQ

Sequences:

>Translated_426_residues
MDKLMDHPWFIRVVSLLLAIMLYMSANVGAKTGEQTRNTFGQEDTETLIDVPVVAYYDEENLIVSGVPQYVNVTLQGPAS
IVKPTALQRNFEVYVDLTDLPLGTYTVPIKYKDVSEKLKVNIQPASVKVTIREKVSKRFPVSVEFFNRNKMPDGYSVGEP
TVEPGTVTITGSKELIDDISFVKAIVDLEGATETLAKKVRVRVYDRQGNEIDVEPQPSVVEVTVPVKSASKTVPLQVQTT
GELPDGVRLVSIHPEPEQVTIYGSKGALDRIKQLDGLTVDLDNVKDDTTVELDVPLPDGVKRIDPSKIKVHINVEKVEKA
ENEENKVEKDEVRTWENIPINVVGLSDSYQADFLEPVGGKINVRLIGPPDIVRGLTKDDVRLYVDVSGLDAGEHRVTIRW
DKPEQVRWEPSAETAMVNISEKAAAQ
>Mature_426_residues
MDKLMDHPWFIRVVSLLLAIMLYMSANVGAKTGEQTRNTFGQEDTETLIDVPVVAYYDEENLIVSGVPQYVNVTLQGPAS
IVKPTALQRNFEVYVDLTDLPLGTYTVPIKYKDVSEKLKVNIQPASVKVTIREKVSKRFPVSVEFFNRNKMPDGYSVGEP
TVEPGTVTITGSKELIDDISFVKAIVDLEGATETLAKKVRVRVYDRQGNEIDVEPQPSVVEVTVPVKSASKTVPLQVQTT
GELPDGVRLVSIHPEPEQVTIYGSKGALDRIKQLDGLTVDLDNVKDDTTVELDVPLPDGVKRIDPSKIKVHINVEKVEKA
ENEENKVEKDEVRTWENIPINVVGLSDSYQADFLEPVGGKINVRLIGPPDIVRGLTKDDVRLYVDVSGLDAGEHRVTIRW
DKPEQVRWEPSAETAMVNISEKAAAQ

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 47266; Mature: 47266

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLMDHPWFIRVVSLLLAIMLYMSANVGAKTGEQTRNTFGQEDTETLIDVPVVAYYDEE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEEECEEEEEECCC
NLIVSGVPQYVNVTLQGPASIVKPTALQRNFEVYVDLTDLPLGTYTVPIKYKDVSEKLKV
CEEEECCCCEEEEEEECCHHHCCCHHHCCCEEEEEEEECCCCCEEEEEEEECCCCCEEEE
NIQPASVKVTIREKVSKRFPVSVEFFNRNKMPDGYSVGEPTVEPGTVTITGSKELIDDIS
EEECCEEEEEEHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHH
FVKAIVDLEGATETLAKKVRVRVYDRQGNEIDVEPQPSVVEVTVPVKSASKTVPLQVQTT
HHHHHHHCCCCHHHHHHEEEEEEEECCCCEEECCCCCCEEEEEEECCCCCCEEEEEEEEC
GELPDGVRLVSIHPEPEQVTIYGSKGALDRIKQLDGLTVDLDNVKDDTTVELDVPLPDGV
CCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCC
KRIDPSKIKVHINVEKVEKAENEENKVEKDEVRTWENIPINVVGLSDSYQADFLEPVGGK
CCCCCCEEEEEEEHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCE
INVRLIGPPDIVRGLTKDDVRLYVDVSGLDAGEHRVTIRWDKPEQVRWEPSAETAMVNIS
EEEEEECCHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEECCCCCEEEEEEH
EKAAAQ
HHHCCC
>Mature Secondary Structure
MDKLMDHPWFIRVVSLLLAIMLYMSANVGAKTGEQTRNTFGQEDTETLIDVPVVAYYDEE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEEECEEEEEECCC
NLIVSGVPQYVNVTLQGPASIVKPTALQRNFEVYVDLTDLPLGTYTVPIKYKDVSEKLKV
CEEEECCCCEEEEEEECCHHHCCCHHHCCCEEEEEEEECCCCCEEEEEEEECCCCCEEEE
NIQPASVKVTIREKVSKRFPVSVEFFNRNKMPDGYSVGEPTVEPGTVTITGSKELIDDIS
EEECCEEEEEEHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHH
FVKAIVDLEGATETLAKKVRVRVYDRQGNEIDVEPQPSVVEVTVPVKSASKTVPLQVQTT
HHHHHHHCCCCHHHHHHEEEEEEEECCCCEEECCCCCCEEEEEEECCCCCCEEEEEEEEC
GELPDGVRLVSIHPEPEQVTIYGSKGALDRIKQLDGLTVDLDNVKDDTTVELDVPLPDGV
CCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCC
KRIDPSKIKVHINVEKVEKAENEENKVEKDEVRTWENIPINVVGLSDSYQADFLEPVGGK
CCCCCCEEEEEEEHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCE
INVRLIGPPDIVRGLTKDDVRLYVDVSGLDAGEHRVTIRWDKPEQVRWEPSAETAMVNIS
EEEEEECCHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEECCCCCEEEEEEH
EKAAAQ
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]