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The map label for this gene is gerD [H]

Identifier: 138893821

GI number: 138893821

Start: 147493

End: 148122

Strand: Reverse

Name: gerD [H]

Synonym: GTNG_0142

Alternate gene names: 138893821

Gene position: 148122-147493 (Counterclockwise)

Preceding gene: 138893823

Following gene: 138893708

Centisome position: 4.17

GC content: 42.22

Gene sequence:

>630_bases
ATGAACAAGTGCATACCGCTCCTCTTGCTCAGTTTTCTCGTTCTTAGCTCTTGTGCTCCTCAAGAAACCAGCCCTGCTCC
CCCGGATTATGAGCAGACGAAACGAATGGTTGTTGACATTTTAAAAACGGACGAGGGGAAAAAGGCGATTCAAGATATTA
TGTTAGAAGACCAAATGAAGCAACAGCTCGTCATGGATCAAACGGCTGTAAAAGAGATACTGCAGCAAGTGTTAACGTCT
GATCAAGGAAAGAAATTTTGGGAAAATGCACTAAAAGACACAAAGTTCGCGGAAAGCTTTGCTAAAGGATTGCAAAAAGA
ACACGAAAAAATGATGAAGGCGCTCATGAAAGATCCTGAATATCAAGCAATGATGATCGACATCCTAAAAAATCCTGAAA
TGGAAAAGGCGATGATCGATGTATTAAAAAGTAAAGAATTCCGCCAACATTTGCAAACAGTGATTATGGAAACGTTAAAT
AGTCCGATATATCAAGCCAAAATTCAAGATATGCTAACAAAAGCAGCAGAAACACTCCAACAAAGCGGCGGAAAACAAGG
AGAGGAAGATGCGGAAGGAGGAGAAGGCGAAGAAGGTGGAGGCGGCAGCCAACAAGGGGAAGGCGGTTAA

Upstream 100 bases:

>100_bases
CCCTTCTAAAAAAGCCAGCTTCCATTTGTCCAAATGCATATTTTTTTCGTCAACATTCATATTAAGGGTGAGGGATTTTT
GCAGAAAGGAGCTCATTTTT

Downstream 100 bases:

>100_bases
TCGAATAAAAAGCGTCCGTGTGCCAAAATTCGCCAACGCTCAAAGGAACGAGCGCGAGCGACTCAAGGCATCGGACGCTT
TATGTTTAAGCTGTTCAATA

Product: spore germination protein GerD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MNKCIPLLLLSFLVLSSCAPQETSPAPPDYEQTKRMVVDILKTDEGKKAIQDIMLEDQMKQQLVMDQTAVKEILQQVLTS
DQGKKFWENALKDTKFAESFAKGLQKEHEKMMKALMKDPEYQAMMIDILKNPEMEKAMIDVLKSKEFRQHLQTVIMETLN
SPIYQAKIQDMLTKAAETLQQSGGKQGEEDAEGGEGEEGGGGSQQGEGG

Sequences:

>Translated_209_residues
MNKCIPLLLLSFLVLSSCAPQETSPAPPDYEQTKRMVVDILKTDEGKKAIQDIMLEDQMKQQLVMDQTAVKEILQQVLTS
DQGKKFWENALKDTKFAESFAKGLQKEHEKMMKALMKDPEYQAMMIDILKNPEMEKAMIDVLKSKEFRQHLQTVIMETLN
SPIYQAKIQDMLTKAAETLQQSGGKQGEEDAEGGEGEEGGGGSQQGEGG
>Mature_209_residues
MNKCIPLLLLSFLVLSSCAPQETSPAPPDYEQTKRMVVDILKTDEGKKAIQDIMLEDQMKQQLVMDQTAVKEILQQVLTS
DQGKKFWENALKDTKFAESFAKGLQKEHEKMMKALMKDPEYQAMMIDILKNPEMEKAMIDVLKSKEFRQHLQTVIMETLN
SPIYQAKIQDMLTKAAETLQQSGGKQGEEDAEGGEGEEGGGGSQQGEGG

Specific function: May be involved in fructose recognition during germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23359; Mature: 23359

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKCIPLLLLSFLVLSSCAPQETSPAPPDYEQTKRMVVDILKTDEGKKAIQDIMLEDQMK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QQLVMDQTAVKEILQQVLTSDQGKKFWENALKDTKFAESFAKGLQKEHEKMMKALMKDPE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YQAMMIDILKNPEMEKAMIDVLKSKEFRQHLQTVIMETLNSPIYQAKIQDMLTKAAETLQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
QSGGKQGEEDAEGGEGEEGGGGSQQGEGG
HCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKCIPLLLLSFLVLSSCAPQETSPAPPDYEQTKRMVVDILKTDEGKKAIQDIMLEDQMK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QQLVMDQTAVKEILQQVLTSDQGKKFWENALKDTKFAESFAKGLQKEHEKMMKALMKDPE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YQAMMIDILKNPEMEKAMIDVLKSKEFRQHLQTVIMETLNSPIYQAKIQDMLTKAAETLQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
QSGGKQGEEDAEGGEGEEGGGGSQQGEGG
HCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2517635; 8969501; 9384377; 8576055; 7559346 [H]