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The map label for this gene is 13488250

Identifier: 13488250

GI number: 13488250

Start: 215385

End: 216587

Strand: Direct

Name: 13488250

Synonym: mlr9231

Alternate gene names: NA

Gene position: 215385-216587 (Clockwise)

Preceding gene: 13488249

Following gene: 13488357

Centisome position: 61.2

GC content: 61.43

Gene sequence:

>1203_bases
GTGGATAATGGCAGCGAGTTCGTCAACAACAGGCTGATCGAATATTGCCTCGGTCACGGCATCGAACTCACTCGCTCGCG
GCCTTACCGTAAGAATGACCAAGCGTGGATAGAGCAGAAAAATGGTGCCGTGGTACGGAAGCTCCTGGGGTATCGGCGCT
TCGAGGGCTTGGCGGCGGCCAGAGCGATCACGCGCCTCTACGCGGCATCCCGGCTGTTCGTGAACTTCTTCCAGCCCTCG
TTCAAGCTGGCTGCCAAACAGCGTGACGGTGCGAAGGTGGCTAAGCGCTATCATCCACCGCAGACCCCCTGCGAGCGTCT
CCTGCAGGCGGAGGCTATCCCGATGGCCGCCAAGAACAAGCTGCGCGAGATCGCCGGCGACCTCGATCCGCTGAAGCTGC
TGGAGGAGATGCGAGCTGTCCAGGCTTATTTGGCGGCGCTGGCTGACGGCGAAACACCGCCACCGGCGACATCGGAACCG
CCCAACCTGGCCGCGTTCGTAGCCAGCCTATCGAGCGCCTGGCATGCGGGCGAAATCCGTCCGACCTTCTCCATCGAAGC
CAAACCGCGTTACCTGCGAAGTCTACAAAAGGTCTCGACACAAACCCTTATTGCGAGTCCCTCGCCGACGCTCAAACCGG
TGATCCCACCCACTCCTCCCGCGACGATGCAGGAGAAGCCGAAGCCGGTCTACGCCGAGCCTGGCCAAGCCCGCGTCCAG
GCGCTCCGCATGGTGTGGCCGATCGTTTGTCGCCGATTGGAGGAATTCCCCAACATCAACGCCACGCAGCTCTTCGAGGA
GCTGTGCGTCCAGTTTCCAGGTCGATTTACCCGCAAGCAGTACAAAACACTCGTTCGACGGGTCAATCTCTGGCGCCAAG
CGGCTCGCGCCCGCGGTGTTGTCGTTGGGCCAAAGACTTATCGTCGGCTCAACGACAAACCGCGCGGCCGACGTCCCGAC
ATCGTTAAGGACCATTGGGAAGAGATGGCACGATGCCTTGAAGAGCGTCCGGATCAGACCGCACTTGAACTTCTCGTCGA
GTTCCAGGCCCGTCACCCCGGACGATACAGCTTGCACCAGCTTCACACGTTGCAGAAGCGAGTAAGGGCGTGGCGACAAC
AAGCCGTGCAGCGGCTCATCGGCGAGGTCAGCAGCCTAGCGCCGTATGTCGCTTCAGACTCCGCACGTCTGGCGAGCGGG
TAA

Upstream 100 bases:

>100_bases
AAATGGATGAGGCAACATTCGAGCCTCAGGGAGCATCGTTACGTGAGGCAATACGGGCCTCTCATCCAGATCGTCGCGCT
ATACCCTGAGAGCGCTGGAT

Downstream 100 bases:

>100_bases
CATTCTTGATGAGGCAGCCGGTAACAAAATTCCTTGAGGCAACACGACATCTAGTCTTGGAACAGAAATGCCGTGGGATC
CAGACATAGCGATTTAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MDNGSEFVNNRLIEYCLGHGIELTRSRPYRKNDQAWIEQKNGAVVRKLLGYRRFEGLAAARAITRLYAASRLFVNFFQPS
FKLAAKQRDGAKVAKRYHPPQTPCERLLQAEAIPMAAKNKLREIAGDLDPLKLLEEMRAVQAYLAALADGETPPPATSEP
PNLAAFVASLSSAWHAGEIRPTFSIEAKPRYLRSLQKVSTQTLIASPSPTLKPVIPPTPPATMQEKPKPVYAEPGQARVQ
ALRMVWPIVCRRLEEFPNINATQLFEELCVQFPGRFTRKQYKTLVRRVNLWRQAARARGVVVGPKTYRRLNDKPRGRRPD
IVKDHWEEMARCLEERPDQTALELLVEFQARHPGRYSLHQLHTLQKRVRAWRQQAVQRLIGEVSSLAPYVASDSARLASG

Sequences:

>Translated_400_residues
MDNGSEFVNNRLIEYCLGHGIELTRSRPYRKNDQAWIEQKNGAVVRKLLGYRRFEGLAAARAITRLYAASRLFVNFFQPS
FKLAAKQRDGAKVAKRYHPPQTPCERLLQAEAIPMAAKNKLREIAGDLDPLKLLEEMRAVQAYLAALADGETPPPATSEP
PNLAAFVASLSSAWHAGEIRPTFSIEAKPRYLRSLQKVSTQTLIASPSPTLKPVIPPTPPATMQEKPKPVYAEPGQARVQ
ALRMVWPIVCRRLEEFPNINATQLFEELCVQFPGRFTRKQYKTLVRRVNLWRQAARARGVVVGPKTYRRLNDKPRGRRPD
IVKDHWEEMARCLEERPDQTALELLVEFQARHPGRYSLHQLHTLQKRVRAWRQQAVQRLIGEVSSLAPYVASDSARLASG
>Mature_400_residues
MDNGSEFVNNRLIEYCLGHGIELTRSRPYRKNDQAWIEQKNGAVVRKLLGYRRFEGLAAARAITRLYAASRLFVNFFQPS
FKLAAKQRDGAKVAKRYHPPQTPCERLLQAEAIPMAAKNKLREIAGDLDPLKLLEEMRAVQAYLAALADGETPPPATSEP
PNLAAFVASLSSAWHAGEIRPTFSIEAKPRYLRSLQKVSTQTLIASPSPTLKPVIPPTPPATMQEKPKPVYAEPGQARVQ
ALRMVWPIVCRRLEEFPNINATQLFEELCVQFPGRFTRKQYKTLVRRVNLWRQAARARGVVVGPKTYRRLNDKPRGRRPD
IVKDHWEEMARCLEERPDQTALELLVEFQARHPGRYSLHQLHTLQKRVRAWRQQAVQRLIGEVSSLAPYVASDSARLASG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 45394; Mature: 45394

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNGSEFVNNRLIEYCLGHGIELTRSRPYRKNDQAWIEQKNGAVVRKLLGYRRFEGLAAA
CCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
RAITRLYAASRLFVNFFQPSFKLAAKQRDGAKVAKRYHPPQTPCERLLQAEAIPMAAKNK
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHH
LREIAGDLDPLKLLEEMRAVQAYLAALADGETPPPATSEPPNLAAFVASLSSAWHAGEIR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PTFSIEAKPRYLRSLQKVSTQTLIASPSPTLKPVIPPTPPATMQEKPKPVYAEPGQARVQ
CCEEECCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ALRMVWPIVCRRLEEFPNINATQLFEELCVQFPGRFTRKQYKTLVRRVNLWRQAARARGV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
VVGPKTYRRLNDKPRGRRPDIVKDHWEEMARCLEERPDQTALELLVEFQARHPGRYSLHQ
EECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
LHTLQKRVRAWRQQAVQRLIGEVSSLAPYVASDSARLASG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHCCC
>Mature Secondary Structure
MDNGSEFVNNRLIEYCLGHGIELTRSRPYRKNDQAWIEQKNGAVVRKLLGYRRFEGLAAA
CCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
RAITRLYAASRLFVNFFQPSFKLAAKQRDGAKVAKRYHPPQTPCERLLQAEAIPMAAKNK
HHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHH
LREIAGDLDPLKLLEEMRAVQAYLAALADGETPPPATSEPPNLAAFVASLSSAWHAGEIR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PTFSIEAKPRYLRSLQKVSTQTLIASPSPTLKPVIPPTPPATMQEKPKPVYAEPGQARVQ
CCEEECCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ALRMVWPIVCRRLEEFPNINATQLFEELCVQFPGRFTRKQYKTLVRRVNLWRQAARARGV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
VVGPKTYRRLNDKPRGRRPDIVKDHWEEMARCLEERPDQTALELLVEFQARHPGRYSLHQ
EECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
LHTLQKRVRAWRQQAVQRLIGEVSSLAPYVASDSARLASG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]