Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13475001

Identifier: 13475001

GI number: 13475001

Start: 4843640

End: 4843831

Strand: Direct

Name: 13475001

Synonym: msr5986

Alternate gene names: NA

Gene position: 4843640-4843831 (Clockwise)

Preceding gene: 13475000

Following gene: 13475002

Centisome position: 68.84

GC content: 65.1

Gene sequence:

>192_bases
GTGCGTACTGCGCGTTGGAAGGCAAGGCGAGGACCAATTCTCGTCGCCGGTACCGACAAGGGCCCCATCATCAACGGTGT
CAAGATGCCGCCGCTTGGCCTCGCTTTCGACTCGCGCCGCCCAGCCGCTTCGAACATCCCCGACCATGTCGCCGGTGAAC
TGACCCAAACGTCGGGGGACGCCTCGGCGTGA

Upstream 100 bases:

>100_bases
GTTTTATCGCATAGATTTATGTTGCGGCTGATTGGGAGCAGGCGGCTTTGAGGAACAGGGAGAGGACGCATTAGCGCTGC
CGCCGAGTCAACAAGGGAAG

Downstream 100 bases:

>100_bases
AGCATCGCCAAGCCTTAACCGGGTGGCCAACGCCCAAACACATTTCGGTCGGCCTTGGCAAGCAGGCCCGGAAGGAGACG
AGACGATGAGGCACCAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MRTARWKARRGPILVAGTDKGPIINGVKMPPLGLAFDSRRPAASNIPDHVAGELTQTSGDASA

Sequences:

>Translated_63_residues
MRTARWKARRGPILVAGTDKGPIINGVKMPPLGLAFDSRRPAASNIPDHVAGELTQTSGDASA
>Mature_63_residues
MRTARWKARRGPILVAGTDKGPIINGVKMPPLGLAFDSRRPAASNIPDHVAGELTQTSGDASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6596; Mature: 6596

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTARWKARRGPILVAGTDKGPIINGVKMPPLGLAFDSRRPAASNIPDHVAGELTQTSGD
CCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCCCC
ASA
CCC
>Mature Secondary Structure
MRTARWKARRGPILVAGTDKGPIINGVKMPPLGLAFDSRRPAASNIPDHVAGELTQTSGD
CCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCEECCCCC
ASA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA