Click here to switch to the map view.

The map label for this gene is 13474990

Identifier: 13474990

GI number: 13474990

Start: 4835361

End: 4835597

Strand: Direct

Name: 13474990

Synonym: msr5976

Alternate gene names: NA

Gene position: 4835361-4835597 (Clockwise)

Preceding gene: 13474989

Following gene: 13474991

Centisome position: 68.72

GC content: 65.4

Gene sequence:

>237_bases
ATGTCGGCGAGACTGGAGGTGGCGGATATCTTCCGCCGCCATGGCGAGGCGTATCGGCAGGCTCATGACGGTCATCTCGG
ACGCGTCGAGCGCCGTACGATGAGCGCCATCGAGTTGTGCCGGACCGCCGAACTGGGCGGCCATGTCGAGGGCTGCCGGT
CCTGCGGGGCGATCCGCGTGGCCTACAATTCCTGTCGCAACCGGCATTGCCCCAAGATCCTATGGGCTGGTGGATAG

Upstream 100 bases:

>100_bases
GCGCTACACCAAGGTCTCGAACGGCCTCATCCGGCGCACGACAAGCCCGCTCGATCGGCTGAACATCGAAGTCGTGCCGC
CGGGCTGATCGGTTCCGCCC

Downstream 100 bases:

>100_bases
CGACCTGCCGTCAGGCAGAATGGCGTTGCTAAACCCACTCATTCTGGAGACGACAATGCAACAGGTTGCAAATCGGCCGG
AACAGGCCGCTATCCGCATC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSARLEVADIFRRHGEAYRQAHDGHLGRVERRTMSAIELCRTAELGGHVEGCRSCGAIRVAYNSCRNRHCPKILWAGG

Sequences:

>Translated_78_residues
MSARLEVADIFRRHGEAYRQAHDGHLGRVERRTMSAIELCRTAELGGHVEGCRSCGAIRVAYNSCRNRHCPKILWAGG
>Mature_77_residues
SARLEVADIFRRHGEAYRQAHDGHLGRVERRTMSAIELCRTAELGGHVEGCRSCGAIRVAYNSCRNRHCPKILWAGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007069 [H]

Pfam domain/function: PF04986 Transposase_32 [H]

EC number: NA

Molecular weight: Translated: 8721; Mature: 8590

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARLEVADIFRRHGEAYRQAHDGHLGRVERRTMSAIELCRTAELGGHVEGCRSCGAIRV
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHH
AYNSCRNRHCPKILWAGG
HHHHHCCCCCCEEEECCC
>Mature Secondary Structure 
SARLEVADIFRRHGEAYRQAHDGHLGRVERRTMSAIELCRTAELGGHVEGCRSCGAIRV
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHH
AYNSCRNRHCPKILWAGG
HHHHHCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]