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The map label for this gene is 13474951

Identifier: 13474951

GI number: 13474951

Start: 4810420

End: 4810710

Strand: Direct

Name: 13474951

Synonym: msr5947

Alternate gene names: NA

Gene position: 4810420-4810710 (Clockwise)

Preceding gene: 13475083

Following gene: 13474963

Centisome position: 68.37

GC content: 58.76

Gene sequence:

>291_bases
GTGAGGCCTGGTCGCAAACGCGAGCTGGTGGCGGATACCTGTACTGAGTGGAACGTGTCGATCCGGCGTGCCTGCCGGGT
TCTGGAGTTCGACACATCGACCTATCACTACAAGTCCCGTCGCCGCGATCAGGCCGGCATCGAAGCTCGGATCAAAGACA
TTTGTGCAACGCGGGTTCGTTATGGCTACCGGCGCGTGCACGTGATGCTCACGCGCGAGGGCTGGGACATCAACATGAAG
CGGACCTATCGGATTTACAGGGACTTAGGACGTAGACTCATTACCGCGTAG

Upstream 100 bases:

>100_bases
GACTGAAGCAGCTTGAGGATGAGAACGGCAAGCTCAGGAAGCTGGTCGCCGACCTGTCGCTGGACAAGGAGATGCTGCAG
GACGTGATCCGCCGAAAACT

Downstream 100 bases:

>100_bases
CCAGATGCGGATTGCGACGAGTTTGAGGGCGGCAAGATAGTTCTCAGCCAGCTTGTCGTATCGGGTTGCGATACGACGGA
ATTGCTTGGCCTTGTTGAAG

Product: transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Integrase Core Domain Protein; Integrase; Transposase Related Protein; Insertion Sequence Transposase Protein; Transposase IS3 Family Protein; IS3 Family Transposase; Transposase Of; Transposase Protein

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MRPGRKRELVADTCTEWNVSIRRACRVLEFDTSTYHYKSRRRDQAGIEARIKDICATRVRYGYRRVHVMLTREGWDINMK
RTYRIYRDLGRRLITA

Sequences:

>Translated_96_residues
MRPGRKRELVADTCTEWNVSIRRACRVLEFDTSTYHYKSRRRDQAGIEARIKDICATRVRYGYRRVHVMLTREGWDINMK
RTYRIYRDLGRRLITA
>Mature_96_residues
MRPGRKRELVADTCTEWNVSIRRACRVLEFDTSTYHYKSRRRDQAGIEARIKDICATRVRYGYRRVHVMLTREGWDINMK
RTYRIYRDLGRRLITA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11655; Mature: 11655

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPGRKRELVADTCTEWNVSIRRACRVLEFDTSTYHYKSRRRDQAGIEARIKDICATRVR
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHH
YGYRRVHVMLTREGWDINMKRTYRIYRDLGRRLITA
HCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRPGRKRELVADTCTEWNVSIRRACRVLEFDTSTYHYKSRRRDQAGIEARIKDICATRVR
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHH
YGYRRVHVMLTREGWDINMKRTYRIYRDLGRRLITA
HCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA