Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13474903
Identifier: 13474903
GI number: 13474903
Start: 4755080
End: 4755994
Strand: Direct
Name: 13474903
Synonym: mlr5887
Alternate gene names: NA
Gene position: 4755080-4755994 (Clockwise)
Preceding gene: 13474902
Following gene: 13474904
Centisome position: 67.58
GC content: 53.33
Gene sequence:
>915_bases ATGGAAAGCTCTTTCGAGGTCGAAACTCGCACCGTCTTTGATCGCTACCAGCGCCAGCAGGAGAATGATGACCACATATT CGACAGGTTGGTCTCTCTAATCGAGGAGGAATATTTCGGCCTGCCAACCGGTAGCTTCCGCGGCCTTGATGTCCTGGATG CGGGCTGCGGCTCCAACGCGAATGCGTCCTGGGCGTTTCTCGACAAGGGGGCACGAAACGTTGTTTCGCTTGAATTGAGC AATGATTGGATGGATTGCGCGCGCAAACGGCTCAGCCGATTTGGGCTGCGCTCGGAACTGGTCGCTGGCAGTGTGCTCGA TCTGCCGTTTGACGACTTCAGTTTCGATTTTGTCCATTGCGCAGGGGTTTTGCCGCACACAAGCAATCCGAAAAAAGGCT TTGAAGAGCTTGCCCGTGTAACCCGCCCCGGCGGCAGCTTCTTTTTGACGATTATGGGTACCGCCAACGGCGTCATTTAC CGATGCATCAATCACTTGCGAGAACTCTACCAAAGCGACGAACAATTCCGCAGTTCCATTGACAATCTGGATGCATCCAC CGCACGCGAAGCCATCAACTGGCTGTTGCGAATAAAGGACGGCGAAGAGAAAGAATATATACCCGGCGAAAACGAATTCT TTCGGAGTCTTTTTGATGATGATTTGTTCGTGACGATCCGGGATCGCTTCCAGGCGCCGACCTATCACGAGTTCGCCTTC ACAGAGGCTCAAATCCGAGGTTGGTATGGCGAGTGCGGCTTCGAGAAAATCCGCAGGATCTCAAGGTATACAAAAAATTT CCATAACCTTCGGCGTTTTCTCGCTCCGATGTACCGTCATTATGACCACCCGCTGGCCCGCTTCTGGTTCGGCGATGGCT GCATCCAGATGATCGGCGAAAAGCCGAGCACGTAG
Upstream 100 bases:
>100_bases CGGCAGTGCATTGCGCTTGGGCAACCTTACACTCGCCGCAGCCGGATCTGTCGCCTTGCTCACAGCGTGAATCAGTTTGT AGCCATAGGGAAGAGAATAC
Downstream 100 bases:
>100_bases TCGGCGTTATTCGTGCCAAGAGAGCGACCCCAATGTGCGGAATCTTTGGGATAGTCCTCAAAAACGAGGGAACACCCGTT TGTGCTGCGGCCGTTGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MESSFEVETRTVFDRYQRQQENDDHIFDRLVSLIEEEYFGLPTGSFRGLDVLDAGCGSNANASWAFLDKGARNVVSLELS NDWMDCARKRLSRFGLRSELVAGSVLDLPFDDFSFDFVHCAGVLPHTSNPKKGFEELARVTRPGGSFFLTIMGTANGVIY RCINHLRELYQSDEQFRSSIDNLDASTAREAINWLLRIKDGEEKEYIPGENEFFRSLFDDDLFVTIRDRFQAPTYHEFAF TEAQIRGWYGECGFEKIRRISRYTKNFHNLRRFLAPMYRHYDHPLARFWFGDGCIQMIGEKPST
Sequences:
>Translated_304_residues MESSFEVETRTVFDRYQRQQENDDHIFDRLVSLIEEEYFGLPTGSFRGLDVLDAGCGSNANASWAFLDKGARNVVSLELS NDWMDCARKRLSRFGLRSELVAGSVLDLPFDDFSFDFVHCAGVLPHTSNPKKGFEELARVTRPGGSFFLTIMGTANGVIY RCINHLRELYQSDEQFRSSIDNLDASTAREAINWLLRIKDGEEKEYIPGENEFFRSLFDDDLFVTIRDRFQAPTYHEFAF TEAQIRGWYGECGFEKIRRISRYTKNFHNLRRFLAPMYRHYDHPLARFWFGDGCIQMIGEKPST >Mature_304_residues MESSFEVETRTVFDRYQRQQENDDHIFDRLVSLIEEEYFGLPTGSFRGLDVLDAGCGSNANASWAFLDKGARNVVSLELS NDWMDCARKRLSRFGLRSELVAGSVLDLPFDDFSFDFVHCAGVLPHTSNPKKGFEELARVTRPGGSFFLTIMGTANGVIY RCINHLRELYQSDEQFRSSIDNLDASTAREAINWLLRIKDGEEKEYIPGENEFFRSLFDDDLFVTIRDRFQAPTYHEFAF TEAQIRGWYGECGFEKIRRISRYTKNFHNLRRFLAPMYRHYDHPLARFWFGDGCIQMIGEKPST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35285; Mature: 35285
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSFEVETRTVFDRYQRQQENDDHIFDRLVSLIEEEYFGLPTGSFRGLDVLDAGCGSNA CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCCCCC NASWAFLDKGARNVVSLELSNDWMDCARKRLSRFGLRSELVAGSVLDLPFDDFSFDFVHC CCCCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHH AGVLPHTSNPKKGFEELARVTRPGGSFFLTIMGTANGVIYRCINHLRELYQSDEQFRSSI HCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH DNLDASTAREAINWLLRIKDGEEKEYIPGENEFFRSLFDDDLFVTIRDRFQAPTYHEFAF HCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHH TEAQIRGWYGECGFEKIRRISRYTKNFHNLRRFLAPMYRHYDHPLARFWFGDGCIQMIGE HHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHCCC KPST CCCC >Mature Secondary Structure MESSFEVETRTVFDRYQRQQENDDHIFDRLVSLIEEEYFGLPTGSFRGLDVLDAGCGSNA CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCCCCC NASWAFLDKGARNVVSLELSNDWMDCARKRLSRFGLRSELVAGSVLDLPFDDFSFDFVHC CCCCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHH AGVLPHTSNPKKGFEELARVTRPGGSFFLTIMGTANGVIYRCINHLRELYQSDEQFRSSI HCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH DNLDASTAREAINWLLRIKDGEEKEYIPGENEFFRSLFDDDLFVTIRDRFQAPTYHEFAF HCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHCCCCCCHHHHH TEAQIRGWYGECGFEKIRRISRYTKNFHNLRRFLAPMYRHYDHPLARFWFGDGCIQMIGE HHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHCCC KPST CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA