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The map label for this gene is fdxB [H]

Identifier: 13474888

GI number: 13474888

Start: 4741097

End: 4741414

Strand: Direct

Name: fdxB [H]

Synonym: mlr5869

Alternate gene names: 13474888

Gene position: 4741097-4741414 (Clockwise)

Preceding gene: 13474887

Following gene: 13474889

Centisome position: 67.38

GC content: 67.3

Gene sequence:

>318_bases
ATGACGGGCGCTTTCGTCACCCGCGACGGCTCTCCCTGGACGCCGCACTATCTGACGGCGATCGATGGCGCGACCTGCAT
CGGCTGCGGCCGCTGCTTCAAGGTCTGCTCGCGCGAGGTCATGCACCTTCATGGCGTCGATGACGCAGGCGAAATCCTCG
GCATCTGCGCGGGCGAGGACGACGACTTCGACGGCGAGCCCAACCGCATGGTCATGATCGTCGACCATGCCGGCCGCTGC
ATCGGCTGCGGCGCCTGCGGCCGCGTCTGCCCGAAGAACTGCCAGACCCACCTTGCGGCCGACCAGCTTGCTGCATGA

Upstream 100 bases:

>100_bases
TCAACTGGACCGAGATCGAGGCGGTCGCCTGGAAAGCCTTCGAGGTTTTTGCCGAGTTGGATGCGGCAAAGGAAGAACTC
GCAGCGTTGGAGAATTCACA

Downstream 100 bases:

>100_bases
GCTGGGAACAAGACCAGCAGAACGGCGCCACATTCGCCCATCACCGTGGCTGTTTCAGCACCAGCCAATGGCCGCCGACA
GACCAGGCGGCGGCGTTCGA

Product: ferredoxin 2[4Fe-4S] III, fdxB

Products: NA

Alternate protein names: Ferredoxin III; FdIII [H]

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTGAFVTRDGSPWTPHYLTAIDGATCIGCGRCFKVCSREVMHLHGVDDAGEILGICAGEDDDFDGEPNRMVMIVDHAGRC
IGCGACGRVCPKNCQTHLAADQLAA

Sequences:

>Translated_105_residues
MTGAFVTRDGSPWTPHYLTAIDGATCIGCGRCFKVCSREVMHLHGVDDAGEILGICAGEDDDFDGEPNRMVMIVDHAGRC
IGCGACGRVCPKNCQTHLAADQLAA
>Mature_104_residues
TGAFVTRDGSPWTPHYLTAIDGATCIGCGRCFKVCSREVMHLHGVDDAGEILGICAGEDDDFDGEPNRMVMIVDHAGRCI
GCGACGRVCPKNCQTHLAADQLAA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014283
- InterPro:   IPR012285 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11085; Mature: 10954

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
13.3 %Cys+Met (Translated Protein)
9.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
12.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAFVTRDGSPWTPHYLTAIDGATCIGCGRCFKVCSREVMHLHGVDDAGEILGICAGED
CCCCEEECCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
DDFDGEPNRMVMIVDHAGRCIGCGACGRVCPKNCQTHLAADQLAA
CCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TGAFVTRDGSPWTPHYLTAIDGATCIGCGRCFKVCSREVMHLHGVDDAGEILGICAGED
CCCEEECCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
DDFDGEPNRMVMIVDHAGRCIGCGACGRVCPKNCQTHLAADQLAA
CCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]