| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474807
Identifier: 13474807
GI number: 13474807
Start: 4656273
End: 4656845
Strand: Direct
Name: 13474807
Synonym: mlr5776
Alternate gene names: NA
Gene position: 4656273-4656845 (Clockwise)
Preceding gene: 13474806
Following gene: 13474812
Centisome position: 66.18
GC content: 60.38
Gene sequence:
>573_bases GTGAATGCTGCGGCTTTTAAGCATGCCGTTGCAGTCTCGCGTGACCGCCCTCAAACCAATGATGCCCTGTTGTTCACAGG CTTTAGGCGATGCGTTTTGCTGGATCGGAGAGGGAATATGGGCAGCACCGGAGAGTTGGTCGGACAAGCAGGGCGTCCTG ATAGCGAAGGAGGCCCGCATCGCATCTCCGACGCAATGTCGGACCAGCAGAAGGCGCGCGAAGAGACGCTTGCCATCGCC GGCGCGGTGGTTGCCCGCGACGGCAATCTCGACGGATTTTCGGATTCAGAGTTGGCCGATTTGGTGAACGGCTTCAGCAG ATGGCCGGACGAGCAGAAGACGCGTGAAGCGCGTTTGATCCCCTCAGACAACAGAGCGATTCCCTACGGCTGGGGAGCGC CGTCGTTGGCGGAGGGCGCGATTGTCGCATGCGCATTGGTGGTGCGAGAGCCCAATGAAGCGGATGGTAAACGCACCCTT CGTGCCGACCGAAATTCACGTCAACACGGTCCCAGGAGACGCCGGGATGTCCATGGCCGCACTACGCCGACTCTGCCGAA AGTGAGGCTCTAA
Upstream 100 bases:
>100_bases TTTGTATAGGGCTCAGCCCTTTGAGCTTCAGCCTGATGTCGAAGCGATCGAGTGGCGAAGAAGCTTTTCATTGCGGCGTT GTCGAGGCAGTTGCCGCTGC
Downstream 100 bases:
>100_bases AAGCCCGGACTTGACGTCGCCATCACATCGCCCTTTTTATCAAAGCCTATTACTCACTCGGGCCGCCGGACAGGATAGTT CAGCACTCAGTCCGCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNAAAFKHAVAVSRDRPQTNDALLFTGFRRCVLLDRRGNMGSTGELVGQAGRPDSEGGPHRISDAMSDQQKAREETLAIA GAVVARDGNLDGFSDSELADLVNGFSRWPDEQKTREARLIPSDNRAIPYGWGAPSLAEGAIVACALVVREPNEADGKRTL RADRNSRQHGPRRRRDVHGRTTPTLPKVRL
Sequences:
>Translated_190_residues MNAAAFKHAVAVSRDRPQTNDALLFTGFRRCVLLDRRGNMGSTGELVGQAGRPDSEGGPHRISDAMSDQQKAREETLAIA GAVVARDGNLDGFSDSELADLVNGFSRWPDEQKTREARLIPSDNRAIPYGWGAPSLAEGAIVACALVVREPNEADGKRTL RADRNSRQHGPRRRRDVHGRTTPTLPKVRL >Mature_190_residues MNAAAFKHAVAVSRDRPQTNDALLFTGFRRCVLLDRRGNMGSTGELVGQAGRPDSEGGPHRISDAMSDQQKAREETLAIA GAVVARDGNLDGFSDSELADLVNGFSRWPDEQKTREARLIPSDNRAIPYGWGAPSLAEGAIVACALVVREPNEADGKRTL RADRNSRQHGPRRRRDVHGRTTPTLPKVRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20733; Mature: 20733
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAAFKHAVAVSRDRPQTNDALLFTGFRRCVLLDRRGNMGSTGELVGQAGRPDSEGGPH CCCHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCH RISDAMSDQQKAREETLAIAGAVVARDGNLDGFSDSELADLVNGFSRWPDEQKTREARLI HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCC PSDNRAIPYGWGAPSLAEGAIVACALVVREPNEADGKRTLRADRNSRQHGPRRRRDVHGR CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHCCCHHHHCCCCC TTPTLPKVRL CCCCCCCCCC >Mature Secondary Structure MNAAAFKHAVAVSRDRPQTNDALLFTGFRRCVLLDRRGNMGSTGELVGQAGRPDSEGGPH CCCHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCH RISDAMSDQQKAREETLAIAGAVVARDGNLDGFSDSELADLVNGFSRWPDEQKTREARLI HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCC PSDNRAIPYGWGAPSLAEGAIVACALVVREPNEADGKRTLRADRNSRQHGPRRRRDVHGR CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHCCCHHHHCCCCC TTPTLPKVRL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA