| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474779
Identifier: 13474779
GI number: 13474779
Start: 4628260
End: 4629198
Strand: Direct
Name: 13474779
Synonym: mlr5745
Alternate gene names: NA
Gene position: 4628260-4629198 (Clockwise)
Preceding gene: 13474777
Following gene: 13474780
Centisome position: 65.78
GC content: 59.21
Gene sequence:
>939_bases ATGAGACATCCTTCGAGACGGCTCTGGGCGAACGTGTCCAGGATATGGTTGAGGCTTGCACACGATGTGGCAAGTGCGCT GAGGTTTGTCCAAGCAATAGCGCCCGCCGGCATCTCGGATGCGACGCCCGAAGACCTCATTGGCGGTGTTCTCGATCTTG TGCGAAACGGTAGCGGTCCGGAAGCGTCCCGCAAATGGGCAGCCGCTTGCATGCTCAGCGGAGAATGTATCAAGGCGTGC GATTACGGCGTCAATCCTCGCTTTCTCCTTACCATGGCGCGCCTTAGCGCTGCGAAGTCCGACAAGGAGCTTGCTGAACG ACGCAGGGCAGGCGTGGAGAGATACCGGGAGGTCAGCCGCGGTGTAACGATGCTGTCGCGCTTGCAACTCGATACGGAGG TCCTGGAAAGGCTGGGTCAAAAATCAGCGTCAGTATCCATGCCCACCGAGCCGGCGGACTTTGTGTTTTACACCGGCTGC AATGTGCTGAAGACGCCGCACATTGCCTTGCTTGCGCTCGATATCATGGATGTGCTCGGTGTCAGTTACCAGGTCATGGG CGGTCCGAGCCATTGTTGCGGTATCGTGCAACTCAAGTCCGGTGACGCCGAGATGAGCGGCCGCATGGGTTCGAGCTCGA TGGAGAAACTGTCGCACTCCAAGTCGGGACAGGTGATCACCTGGTGTCCGACCTGCTACGTCCAGTTCACGGAAAACATC CTGCCAACGGTGGAACGACAGCGCGGCTCCCGCCCGTTCGAGATGAACCCATTCCTAAGATTTATCGGCCAGCGGCTGGC GCAGTTAAAGCCGCATCTGCAGCGCAGGGTCGAGATGCGCGTCGCGCTGCACAAGCATCCTGGCGTCGCGGGCATCGTGG AGGCCGCCACCGAAAGCCTTAAGATGATCCCTGGCATCTCGCTTGTCGATCTGAACTAG
Upstream 100 bases:
>100_bases CTCGTCCTTCAAGATTACCGATTCTTATGTTAATTTCCGAGCTGCCAATGCGCGCACAAGGCCCATTCCTCAGACTTGGA GCCCGCGATGCCCCCAGTGA
Downstream 100 bases:
>100_bases CCCGCTGTAGGTCTGCAAAGCGTGCATGTCGGTGCGCTTCCGAAGTTCAAGCGTGAGTTGCAGTTGAGGGAACTCGAAGC GGCTAGTGCCGCGGGTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MRHPSRRLWANVSRIWLRLAHDVASALRFVQAIAPAGISDATPEDLIGGVLDLVRNGSGPEASRKWAAACMLSGECIKAC DYGVNPRFLLTMARLSAAKSDKELAERRRAGVERYREVSRGVTMLSRLQLDTEVLERLGQKSASVSMPTEPADFVFYTGC NVLKTPHIALLALDIMDVLGVSYQVMGGPSHCCGIVQLKSGDAEMSGRMGSSSMEKLSHSKSGQVITWCPTCYVQFTENI LPTVERQRGSRPFEMNPFLRFIGQRLAQLKPHLQRRVEMRVALHKHPGVAGIVEAATESLKMIPGISLVDLN
Sequences:
>Translated_312_residues MRHPSRRLWANVSRIWLRLAHDVASALRFVQAIAPAGISDATPEDLIGGVLDLVRNGSGPEASRKWAAACMLSGECIKAC DYGVNPRFLLTMARLSAAKSDKELAERRRAGVERYREVSRGVTMLSRLQLDTEVLERLGQKSASVSMPTEPADFVFYTGC NVLKTPHIALLALDIMDVLGVSYQVMGGPSHCCGIVQLKSGDAEMSGRMGSSSMEKLSHSKSGQVITWCPTCYVQFTENI LPTVERQRGSRPFEMNPFLRFIGQRLAQLKPHLQRRVEMRVALHKHPGVAGIVEAATESLKMIPGISLVDLN >Mature_312_residues MRHPSRRLWANVSRIWLRLAHDVASALRFVQAIAPAGISDATPEDLIGGVLDLVRNGSGPEASRKWAAACMLSGECIKAC DYGVNPRFLLTMARLSAAKSDKELAERRRAGVERYREVSRGVTMLSRLQLDTEVLERLGQKSASVSMPTEPADFVFYTGC NVLKTPHIALLALDIMDVLGVSYQVMGGPSHCCGIVQLKSGDAEMSGRMGSSSMEKLSHSKSGQVITWCPTCYVQFTENI LPTVERQRGSRPFEMNPFLRFIGQRLAQLKPHLQRRVEMRVALHKHPGVAGIVEAATESLKMIPGISLVDLN
Specific function: Unknown
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34327; Mature: 34327
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHPSRRLWANVSRIWLRLAHDVASALRFVQAIAPAGISDATPEDLIGGVLDLVRNGSGP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC EASRKWAAACMLSGECIKACDYGVNPRFLLTMARLSAAKSDKELAERRRAGVERYREVSR CHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GVTMLSRLQLDTEVLERLGQKSASVSMPTEPADFVFYTGCNVLKTPHIALLALDIMDVLG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHCCCHHHHHHHHHHHHHC VSYQVMGGPSHCCGIVQLKSGDAEMSGRMGSSSMEKLSHSKSGQVITWCPTCYVQFTENI CCEEECCCCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHH LPTVERQRGSRPFEMNPFLRFIGQRLAQLKPHLQRRVEMRVALHKHPGVAGIVEAATESL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KMIPGISLVDLN HHCCCCEEEECC >Mature Secondary Structure MRHPSRRLWANVSRIWLRLAHDVASALRFVQAIAPAGISDATPEDLIGGVLDLVRNGSGP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC EASRKWAAACMLSGECIKACDYGVNPRFLLTMARLSAAKSDKELAERRRAGVERYREVSR CHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GVTMLSRLQLDTEVLERLGQKSASVSMPTEPADFVFYTGCNVLKTPHIALLALDIMDVLG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHCCCHHHHHHHHHHHHHC VSYQVMGGPSHCCGIVQLKSGDAEMSGRMGSSSMEKLSHSKSGQVITWCPTCYVQFTENI CCEEECCCCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHH LPTVERQRGSRPFEMNPFLRFIGQRLAQLKPHLQRRVEMRVALHKHPGVAGIVEAATESL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KMIPGISLVDLN HHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA