| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474768
Identifier: 13474768
GI number: 13474768
Start: 4614474
End: 4614983
Strand: Direct
Name: 13474768
Synonym: mlr5732
Alternate gene names: NA
Gene position: 4614474-4614983 (Clockwise)
Preceding gene: 13474765
Following gene: 13474769
Centisome position: 65.58
GC content: 56.27
Gene sequence:
>510_bases GTGGAACCTTTGCCAGCACGAAACCTTCTCCTTGTGACCCTAGGAGGAAAACGAATGGCAAATCTTGGAAGAATGGCTGT CGCCATACTCGGCATTCTGGCCTATCAAAATCGCGACAAGATCGGAGACTTGATCCGCGGTGGGGGAAATACCGATCCGA ACAATCCTCAAGGCGGGCTCTTGGATCAGGTATCCAAGAGTGTCTCGGGGACGGCGTTGGGGGACATCCTCGACCGCTTC AGGAATGCGGGAGCAGGGTCGAAAGTGGATTCGTGGGTCAGTCGCGGCCCGAACCAGCCGATCGACCCGAAAGATGTCGA AACAGCGATAGACGAGGACACTCTCACATCGCTTTCCATGCAAACTGGCCTGTCGCGCGACGAACTGATTGCCAGGATCA CGAAAGACCTGCCGGAGGCGGTCGACAAGCTGACTCCAAATGGCGAACTGCCAGCACCCACTGATGAGATTACACTCCTC GATCAGGTGCCGCCACGCACAGGAACCTAA
Upstream 100 bases:
>100_bases AAGCACTTGTGCGGCGAAGAGGATCTGCGACACGCTTCCTTGCAGGATTTCCGGCTGGAGACGGACTGAACGCATTGGGA GCTCTAGTCGACCCGAACGG
Downstream 100 bases:
>100_bases CCTGATCGTGCGACAGAACATTGTTTGCGGGGCAACATTCAAAGGTCGGTCAGCCAACGGAGGCTTTCCATGACCCGAAG ACGAGTGGACAAGGAACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MEPLPARNLLLVTLGGKRMANLGRMAVAILGILAYQNRDKIGDLIRGGGNTDPNNPQGGLLDQVSKSVSGTALGDILDRF RNAGAGSKVDSWVSRGPNQPIDPKDVETAIDEDTLTSLSMQTGLSRDELIARITKDLPEAVDKLTPNGELPAPTDEITLL DQVPPRTGT
Sequences:
>Translated_169_residues MEPLPARNLLLVTLGGKRMANLGRMAVAILGILAYQNRDKIGDLIRGGGNTDPNNPQGGLLDQVSKSVSGTALGDILDRF RNAGAGSKVDSWVSRGPNQPIDPKDVETAIDEDTLTSLSMQTGLSRDELIARITKDLPEAVDKLTPNGELPAPTDEITLL DQVPPRTGT >Mature_169_residues MEPLPARNLLLVTLGGKRMANLGRMAVAILGILAYQNRDKIGDLIRGGGNTDPNNPQGGLLDQVSKSVSGTALGDILDRF RNAGAGSKVDSWVSRGPNQPIDPKDVETAIDEDTLTSLSMQTGLSRDELIARITKDLPEAVDKLTPNGELPAPTDEITLL DQVPPRTGT
Specific function: Unknown
COG id: COG3753
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17950; Mature: 17950
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPLPARNLLLVTLGGKRMANLGRMAVAILGILAYQNRDKIGDLIRGGGNTDPNNPQGGL CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCH LDQVSKSVSGTALGDILDRFRNAGAGSKVDSWVSRGPNQPIDPKDVETAIDEDTLTSLSM HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHH QTGLSRDELIARITKDLPEAVDKLTPNGELPAPTDEITLLDQVPPRTGT HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MEPLPARNLLLVTLGGKRMANLGRMAVAILGILAYQNRDKIGDLIRGGGNTDPNNPQGGL CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCH LDQVSKSVSGTALGDILDRFRNAGAGSKVDSWVSRGPNQPIDPKDVETAIDEDTLTSLSM HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHH QTGLSRDELIARITKDLPEAVDKLTPNGELPAPTDEITLLDQVPPRTGT HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA