| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474449
Identifier: 13474449
GI number: 13474449
Start: 4262514
End: 4263206
Strand: Reverse
Name: 13474449
Synonym: mll5333
Alternate gene names: NA
Gene position: 4263206-4262514 (Counterclockwise)
Preceding gene: 13474450
Following gene: 13474446
Centisome position: 60.59
GC content: 66.23
Gene sequence:
>693_bases ATGAGCAGATTTCAGACAACCGGTCTTGGACAGGACGAATTCGCGGAGATGGTCGCGGAGGACGTCGAACGTGCGCTTGC CCATTATGACGAAGCCATAAACCAGTCCACCATGGTCTCGGTCGGCAAGATCGCCGGCAGCATAGCATCCGCCGTCACCT TGCTGTCGCCGAAGCACCAGCGCGCCATCGACGCCATCCATGCCGACCTTCCCGGCCTTGCCTCGAAATTCGTGCGCGCG CTGGCGGCCGAAGCCGCGCGCCGCAGCGAAGCCGGCGTCACCGATATGCCGACGGCGTTGCCGGCCGATGAAACGCTTGC CGCGCCGCCACGGTCCGACGACCTCGAATCGATGCTGATCGAGGACTGGGCCGGCCGTGTCGCCGGCTCGACCTATCTGG AGGAAAACCTGCGCATCGCCCGCTCGACCCTGCACCGCTGGCAGAGGCGCGGCGACGTCATCGCCTTGCGCAAGGGCGGC CGCAAGCACGTCTTCCCGCTGGCGCAATTCGTCGACGGCAGGCCGGTCGCGGGCATAAGCGACGTGCAGTCGCTGATCGG CAATCCGCGACTGACCTGGCTGTGGCTCACGCGCCCGGCAGCACAACTCGACGGCCGCATTCCGATCGATCTGCTGCGGC AGGACCAGATCGAGGAAGTGGTCGAAGCGGCACGAGCGTTCGCGCCGAGCTGA
Upstream 100 bases:
>100_bases CGGCGCGATCCGTCGCCGCCATGATTTTCGTTTTCCGCAGTAGACATTCAGCAATCGGCCGCGGCAGAGGGAGGAGCGCG CGCGGCCGGAAGACAGATGC
Downstream 100 bases:
>100_bases AGCCCGCGCGGTCAACCCTTGGGTTTCGGAATCGGCATAGTTCGCGCCGATGGCTACGCCGTCTTGCGAAGGCGAGGCCT GGACGACGGCTGTTGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSRFQTTGLGQDEFAEMVAEDVERALAHYDEAINQSTMVSVGKIAGSIASAVTLLSPKHQRAIDAIHADLPGLASKFVRA LAAEAARRSEAGVTDMPTALPADETLAAPPRSDDLESMLIEDWAGRVAGSTYLEENLRIARSTLHRWQRRGDVIALRKGG RKHVFPLAQFVDGRPVAGISDVQSLIGNPRLTWLWLTRPAAQLDGRIPIDLLRQDQIEEVVEAARAFAPS
Sequences:
>Translated_230_residues MSRFQTTGLGQDEFAEMVAEDVERALAHYDEAINQSTMVSVGKIAGSIASAVTLLSPKHQRAIDAIHADLPGLASKFVRA LAAEAARRSEAGVTDMPTALPADETLAAPPRSDDLESMLIEDWAGRVAGSTYLEENLRIARSTLHRWQRRGDVIALRKGG RKHVFPLAQFVDGRPVAGISDVQSLIGNPRLTWLWLTRPAAQLDGRIPIDLLRQDQIEEVVEAARAFAPS >Mature_229_residues SRFQTTGLGQDEFAEMVAEDVERALAHYDEAINQSTMVSVGKIAGSIASAVTLLSPKHQRAIDAIHADLPGLASKFVRAL AAEAARRSEAGVTDMPTALPADETLAAPPRSDDLESMLIEDWAGRVAGSTYLEENLRIARSTLHRWQRRGDVIALRKGGR KHVFPLAQFVDGRPVAGISDVQSLIGNPRLTWLWLTRPAAQLDGRIPIDLLRQDQIEEVVEAARAFAPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25054; Mature: 24922
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFQTTGLGQDEFAEMVAEDVERALAHYDEAINQSTMVSVGKIAGSIASAVTLLSPKHQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHH RAIDAIHADLPGLASKFVRALAAEAARRSEAGVTDMPTALPADETLAAPPRSDDLESMLI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH EDWAGRVAGSTYLEENLRIARSTLHRWQRRGDVIALRKGGRKHVFPLAQFVDGRPVAGIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCHH DVQSLIGNPRLTWLWLTRPAAQLDGRIPIDLLRQDQIEEVVEAARAFAPS HHHHHHCCCCEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRFQTTGLGQDEFAEMVAEDVERALAHYDEAINQSTMVSVGKIAGSIASAVTLLSPKHQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHH RAIDAIHADLPGLASKFVRALAAEAARRSEAGVTDMPTALPADETLAAPPRSDDLESMLI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH EDWAGRVAGSTYLEENLRIARSTLHRWQRRGDVIALRKGGRKHVFPLAQFVDGRPVAGIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCHH DVQSLIGNPRLTWLWLTRPAAQLDGRIPIDLLRQDQIEEVVEAARAFAPS HHHHHHCCCCEEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA