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The map label for this gene is exoY [H]

Identifier: 13474378

GI number: 13474378

Start: 4182614

End: 4183291

Strand: Reverse

Name: exoY [H]

Synonym: mll5252

Alternate gene names: 13474378

Gene position: 4183291-4182614 (Counterclockwise)

Preceding gene: 13474380

Following gene: 13474377

Centisome position: 59.45

GC content: 61.65

Gene sequence:

>678_bases
ATGAGGGATATTGCCAAGTCGGCCACGGCGGACTTTTCGCAGGCTGACACCGATTTTCCGCCGCCGATCGGCGGCCTCAT
CAAGCGCAGCTTCGATATTGTCGGTTCACTGGTTGGTCTGATCGCTCTCAGCCCGCTGTTCATCATGGTAGCGCTGCTGG
TCAAATTTTCCGACGGTGGATCGATTTTCTACGGCCATCGGCGAATCGGGCGCGGCGGACGGATTTTTCCGTGCCTGAAA
TTCCGCACCATGGTTCCGGACGGTGACAAGGTGCTGGCCGCCTATCTCGCCACCAATCCGGAGGCCAATGCGGAATGGAT
AGCGACCCGCAAGCTGAAGAACGATCCACGCGTCACCCGCGTCGGCGCGGTGCTGCGCAAGCTCAGCCTCGACGAATTGC
CGCAGATCATCAACATCCTGCAGGGCGATATGAGCCTTGTCGGGCCTCGACCGGTGGTGCGCGACGAGCTGGAAATCTAC
GGCAGCGCCGCCGTCTACTATCTGAAGTCGCGGCCCGGCCTGACCGGCCTGTGGCAGGTCAGCGGCCGCAACGACGTCTC
CTACGACAGCCGCGTCGCCTTCGACCGCCATTATGTCGAGAACTGGTCGCTGTTCGGCGACGTGCGCATCATCATCAAGA
CCGTGCCGGCCGTCTGGATGTCCCGCGGCTCTTACTGA

Upstream 100 bases:

>100_bases
TGACGCGACTATTTCAGTGGGCCGGGAAATTGTGTGTTGCGCTGCAACATTTTTTTGGTATCGTGTGGTGAACCATTCGT
TCAACGCATGGAGTTTCCGC

Downstream 100 bases:

>100_bases
CCGGCTGCCGGCACCAGGCATCCGGAGGCAAGCTCATCGGGCGATGGGGCTAAAACGGATCGGAACGTTCAGTTGAAAAA
AGACATGTTCGAAGCCTTTG

Product: exopolysaccharide production protein exoY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRDIAKSATADFSQADTDFPPPIGGLIKRSFDIVGSLVGLIALSPLFIMVALLVKFSDGGSIFYGHRRIGRGGRIFPCLK
FRTMVPDGDKVLAAYLATNPEANAEWIATRKLKNDPRVTRVGAVLRKLSLDELPQIINILQGDMSLVGPRPVVRDELEIY
GSAAVYYLKSRPGLTGLWQVSGRNDVSYDSRVAFDRHYVENWSLFGDVRIIIKTVPAVWMSRGSY

Sequences:

>Translated_225_residues
MRDIAKSATADFSQADTDFPPPIGGLIKRSFDIVGSLVGLIALSPLFIMVALLVKFSDGGSIFYGHRRIGRGGRIFPCLK
FRTMVPDGDKVLAAYLATNPEANAEWIATRKLKNDPRVTRVGAVLRKLSLDELPQIINILQGDMSLVGPRPVVRDELEIY
GSAAVYYLKSRPGLTGLWQVSGRNDVSYDSRVAFDRHYVENWSLFGDVRIIIKTVPAVWMSRGSY
>Mature_225_residues
MRDIAKSATADFSQADTDFPPPIGGLIKRSFDIVGSLVGLIALSPLFIMVALLVKFSDGGSIFYGHRRIGRGGRIFPCLK
FRTMVPDGDKVLAAYLATNPEANAEWIATRKLKNDPRVTRVGAVLRKLSLDELPQIINILQGDMSLVGPRPVVRDELEIY
GSAAVYYLKSRPGLTGLWQVSGRNDVSYDSRVAFDRHYVENWSLFGDVRIIIKTVPAVWMSRGSY

Specific function: Needed for the addition of the first sugar (galactose) to the isoprenoid carrier. May function as a sugar transferase [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=219, Percent_Identity=36.5296803652968, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 24933; Mature: 24933

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDIAKSATADFSQADTDFPPPIGGLIKRSFDIVGSLVGLIALSPLFIMVALLVKFSDGG
CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SIFYGHRRIGRGGRIFPCLKFRTMVPDGDKVLAAYLATNPEANAEWIATRKLKNDPRVTR
CEEECCCEECCCCCEEEEEEEEEECCCCHHHEEHHHHCCCCCCCCEEEEHHCCCCCCHHH
VGAVLRKLSLDELPQIINILQGDMSLVGPRPVVRDELEIYGSAAVYYLKSRPGLTGLWQV
HHHHHHHHCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCEEEEEEECCCCCCEEEEE
SGRNDVSYDSRVAFDRHYVENWSLFGDVRIIIKTVPAVWMSRGSY
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRDIAKSATADFSQADTDFPPPIGGLIKRSFDIVGSLVGLIALSPLFIMVALLVKFSDGG
CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SIFYGHRRIGRGGRIFPCLKFRTMVPDGDKVLAAYLATNPEANAEWIATRKLKNDPRVTR
CEEECCCEECCCCCEEEEEEEEEECCCCHHHEEHHHHCCCCCCCCEEEEHHCCCCCCHHH
VGAVLRKLSLDELPQIINILQGDMSLVGPRPVVRDELEIYGSAAVYYLKSRPGLTGLWQV
HHHHHHHHCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCEEEEEEECCCCCCEEEEE
SGRNDVSYDSRVAFDRHYVENWSLFGDVRIIIKTVPAVWMSRGSY
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2152899 [H]