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The map label for this gene is glxA [H]

Identifier: 13474332

GI number: 13474332

Start: 4129432

End: 4130409

Strand: Reverse

Name: glxA [H]

Synonym: mll5195

Alternate gene names: 13474332

Gene position: 4130409-4129432 (Counterclockwise)

Preceding gene: 13474334

Following gene: 13474330

Centisome position: 58.7

GC content: 64.72

Gene sequence:

>978_bases
ATGATCCAGTCCTTCCGATCGAAACGCTTGACCATCAACCTAGCTGCGGTAGGACTTGTCCGAAATGACATATATCGCGC
AAAAACTGCCATGACCCGCAAGGTTGGCATCATCATTCACCCCGGCTTCCAGTTGCTGGATGCGGCCGGCCCGGCGGCCG
CCTTTGAGCTGGCGGAAGGTTTTTGCGTTGGCAGCTACATGCTCGAGATACTGGCGCCCGGCGGAGAGGAGATCGAGAGC
TCATCCGGCATGCGGCTTGCGGCCCGGCCTTTGTCGATGGAAGAGCCGCTCGACACCGCCATCATCTCCGGTGGCGAAAT
CATTCGCTCCATGGCCGCCGCCCAGGAGATCGTCGCCTGGCTTCGGCGCACGGGCGTGAGACGAACGGCGAGCGTGTGCA
CCGGCGCCTATCTGCTGGCCGAAGCTGGACTTCTCGATGGCAGGCGCGCCACCACCCACTGGTGGAGCACGCACGATTTC
GCACGCCGCTACCCCGCAGTGAAACTCGATGCGGAGCGGATCTTCGTCAGGGATGGCAGCGTGTGGACCTCGGCCGGCAT
TTCGGCCGGCATCGACCTGGCATTGGCGCTCATCGAGGATGATCTCGGCCCGGCCATAGCCCGCCGCGTTGCGCAGCAGC
TTGTCGTTCATCAACGCCGCCCCGGCGGCCAGTCGCAATTCTCCGCGCTTGTCGAACTCGGCGGACGGACGGGCCGCTTT
ATCGAGCTGATCGAATGGATGCGCACCGCGCTGGCCCAGCCGTTGACGGTGGAGTGCCTTGCCGATCGTGCCGCCATGAG
CCCGCGGCATTTTGCGCGCGCCTTCAAGGCGGAAACCGGCACCACTCCGGCCAAGGCCGTGGAACGAATTCGCCTGGAGA
GCGCGCGGATCGCGGTGGAAACAGCCCCATGTCGCTCGATCGCATCGCGGAAGAGAGCGGCTTCGGCGATGCCGGGCGAA
TGCGCCGCGCGTTCCTGA

Upstream 100 bases:

>100_bases
AGCCTGGGATGCCGCCGGCAGCGACAATAGCCATGCGGCACCCAATGCGAGGAGGGCCACCACGACGCCGAGACCACTCC
ACAGCATGATACGCAAATTC

Downstream 100 bases:

>100_bases
GAAGCTTTGGCCAGCCGCCGCAGGCACTCAGGCGGGCAGCGGCGATTTCCCGCAACGGCGGCCGGTAACGTCCTTCGACG
CATTCATGTCGCCCCGGCGG

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIQSFRSKRLTINLAAVGLVRNDIYRAKTAMTRKVGIIIHPGFQLLDAAGPAAAFELAEGFCVGSYMLEILAPGGEEIES
SSGMRLAARPLSMEEPLDTAIISGGEIIRSMAAAQEIVAWLRRTGVRRTASVCTGAYLLAEAGLLDGRRATTHWWSTHDF
ARRYPAVKLDAERIFVRDGSVWTSAGISAGIDLALALIEDDLGPAIARRVAQQLVVHQRRPGGQSQFSALVELGGRTGRF
IELIEWMRTALAQPLTVECLADRAAMSPRHFARAFKAETGTTPAKAVERIRLESARIAVETAPCRSIASRKRAASAMPGE
CAARS

Sequences:

>Translated_325_residues
MIQSFRSKRLTINLAAVGLVRNDIYRAKTAMTRKVGIIIHPGFQLLDAAGPAAAFELAEGFCVGSYMLEILAPGGEEIES
SSGMRLAARPLSMEEPLDTAIISGGEIIRSMAAAQEIVAWLRRTGVRRTASVCTGAYLLAEAGLLDGRRATTHWWSTHDF
ARRYPAVKLDAERIFVRDGSVWTSAGISAGIDLALALIEDDLGPAIARRVAQQLVVHQRRPGGQSQFSALVELGGRTGRF
IELIEWMRTALAQPLTVECLADRAAMSPRHFARAFKAETGTTPAKAVERIRLESARIAVETAPCRSIASRKRAASAMPGE
CAARS
>Mature_325_residues
MIQSFRSKRLTINLAAVGLVRNDIYRAKTAMTRKVGIIIHPGFQLLDAAGPAAAFELAEGFCVGSYMLEILAPGGEEIES
SSGMRLAARPLSMEEPLDTAIISGGEIIRSMAAAQEIVAWLRRTGVRRTASVCTGAYLLAEAGLLDGRRATTHWWSTHDF
ARRYPAVKLDAERIFVRDGSVWTSAGISAGIDLALALIEDDLGPAIARRVAQQLVVHQRRPGGQSQFSALVELGGRTGRF
IELIEWMRTALAQPLTVECLADRAAMSPRHFARAFKAETGTTPAKAVERIRLESARIAVETAPCRSIASRKRAASAMPGE
CAARS

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35126; Mature: 35126

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSFRSKRLTINLAAVGLVRNDIYRAKTAMTRKVGIIIHPGFQLLDAAGPAAAFELAEG
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHCCCCHHHHHHHCC
FCVGSYMLEILAPGGEEIESSSGMRLAARPLSMEEPLDTAIISGGEIIRSMAAAQEIVAW
HHHHHHHHHHHCCCCCHHHCCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
LRRTGVRRTASVCTGAYLLAEAGLLDGRRATTHWWSTHDFARRYPAVKLDAERIFVRDGS
HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCEEEEECCC
VWTSAGISAGIDLALALIEDDLGPAIARRVAQQLVVHQRRPGGQSQFSALVELGGRTGRF
EEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHH
IELIEWMRTALAQPLTVECLADRAAMSPRHFARAFKAETGTTPAKAVERIRLESARIAVE
HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEE
TAPCRSIASRKRAASAMPGECAARS
CCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIQSFRSKRLTINLAAVGLVRNDIYRAKTAMTRKVGIIIHPGFQLLDAAGPAAAFELAEG
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHCCCCHHHHHHHCC
FCVGSYMLEILAPGGEEIESSSGMRLAARPLSMEEPLDTAIISGGEIIRSMAAAQEIVAW
HHHHHHHHHHHCCCCCHHHCCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
LRRTGVRRTASVCTGAYLLAEAGLLDGRRATTHWWSTHDFARRYPAVKLDAERIFVRDGS
HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCEEEEECCC
VWTSAGISAGIDLALALIEDDLGPAIARRVAQQLVVHQRRPGGQSQFSALVELGGRTGRF
EEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHH
IELIEWMRTALAQPLTVECLADRAAMSPRHFARAFKAETGTTPAKAVERIRLESARIAVE
HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEE
TAPCRSIASRKRAASAMPGECAARS
CCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]