| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474319
Identifier: 13474319
GI number: 13474319
Start: 4114253
End: 4115068
Strand: Reverse
Name: 13474319
Synonym: mll5179
Alternate gene names: NA
Gene position: 4115068-4114253 (Counterclockwise)
Preceding gene: 13474320
Following gene: 13474313
Centisome position: 58.49
GC content: 62.75
Gene sequence:
>816_bases ATGATCACACCCACACAGACATTTGACTGGAACGGCACGACCATCGCATGGGGGACCACCGGTTCGGGCCCGCCAATCGT ACTCGTGCATGGAACGCCGTTCTCCTCGCATGTCTGGCATCGCGTCGCACCGGAACTGGCGCGTGGCCATACGCTGTATT TCTACGATCTTCCCGGATATGGGCGATCCGACAAGCGGGAAGGTCAGGACGTTTCGCTCGGCATCCAGAACAAGGCGCTG GCGGCGATGCTGGCCTTCTGGAAGCTCGACCGACCCCAAATCATCGCCCATGATTTCGGCGGCGCCACGGCGTTACGCGC GCATCTGATCGACGGCTGCGACTACGACAGGCTGCTGCTGATCGACCCGGTGGCGGTGCGCCCCTGGGGCTCGCCCTTTG TCCGGCATGTGCGTCAGCACGAGGCCGCTTTCGCCGGCTTGCCGGACTACATACAAGCGGCGATTCTGAAAGCGTATGTT TCGGGCGCAGCGACCAGGCCTTTGTCGGACAGCGATCTGGAACCTTACATCGCACCATGGACCGGCTCCGTTGGCCAGCC GGCTTTCTACCGGCAGATCGCCCAAATGGATCAACGCTTTACCGATGAGGTCGAACCGCTCTACGGCCAATTGCGCTGCC CCGTCACCTTGCTGTGGGGAGAGGAAGACCGCTGGATACCGCCGCAAAGCGGCCAAAAGCTCGCGGCCATGCTGCCGGGT TGCGCCTTGACCCTCGTCCCCGGCTCCGGCCACCTCATGCAGGAAGATAGACCCGAAGCGATCGTCGCCGCAGCGTTGCG TTTCTTTGCCGGCTGA
Upstream 100 bases:
>100_bases AGGAGTGAATCCCGTTGAACCTAGTGTCAGAATTTGGCGGTTCTGGACGTGGTCGCGAGGGACTATCGTCGCGGGACGAA CCGCCGGCCGATGAAGCACC
Downstream 100 bases:
>100_bases AGGTTTATTTACCCGGCGAGGTGCGGAAAAAGTCCGAGCAGTCCAACGACGATCAGATAGAGCGCGACGATGTAGTTCAG CAGCCGTGGCATGATCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MITPTQTFDWNGTTIAWGTTGSGPPIVLVHGTPFSSHVWHRVAPELARGHTLYFYDLPGYGRSDKREGQDVSLGIQNKAL AAMLAFWKLDRPQIIAHDFGGATALRAHLIDGCDYDRLLLIDPVAVRPWGSPFVRHVRQHEAAFAGLPDYIQAAILKAYV SGAATRPLSDSDLEPYIAPWTGSVGQPAFYRQIAQMDQRFTDEVEPLYGQLRCPVTLLWGEEDRWIPPQSGQKLAAMLPG CALTLVPGSGHLMQEDRPEAIVAAALRFFAG
Sequences:
>Translated_271_residues MITPTQTFDWNGTTIAWGTTGSGPPIVLVHGTPFSSHVWHRVAPELARGHTLYFYDLPGYGRSDKREGQDVSLGIQNKAL AAMLAFWKLDRPQIIAHDFGGATALRAHLIDGCDYDRLLLIDPVAVRPWGSPFVRHVRQHEAAFAGLPDYIQAAILKAYV SGAATRPLSDSDLEPYIAPWTGSVGQPAFYRQIAQMDQRFTDEVEPLYGQLRCPVTLLWGEEDRWIPPQSGQKLAAMLPG CALTLVPGSGHLMQEDRPEAIVAAALRFFAG >Mature_271_residues MITPTQTFDWNGTTIAWGTTGSGPPIVLVHGTPFSSHVWHRVAPELARGHTLYFYDLPGYGRSDKREGQDVSLGIQNKAL AAMLAFWKLDRPQIIAHDFGGATALRAHLIDGCDYDRLLLIDPVAVRPWGSPFVRHVRQHEAAFAGLPDYIQAAILKAYV SGAATRPLSDSDLEPYIAPWTGSVGQPAFYRQIAQMDQRFTDEVEPLYGQLRCPVTLLWGEEDRWIPPQSGQKLAAMLPG CALTLVPGSGHLMQEDRPEAIVAAALRFFAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 29815; Mature: 29815
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITPTQTFDWNGTTIAWGTTGSGPPIVLVHGTPFSSHVWHRVAPELARGHTLYFYDLPGY CCCCCCEECCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCC GRSDKREGQDVSLGIQNKALAAMLAFWKLDRPQIIAHDFGGATALRAHLIDGCDYDRLLL CCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEE IDPVAVRPWGSPFVRHVRQHEAAFAGLPDYIQAAILKAYVSGAATRPLSDSDLEPYIAPW ECCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC TGSVGQPAFYRQIAQMDQRFTDEVEPLYGQLRCPVTLLWGEEDRWIPPQSGQKLAAMLPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCC CALTLVPGSGHLMQEDRPEAIVAAALRFFAG CEEEEECCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MITPTQTFDWNGTTIAWGTTGSGPPIVLVHGTPFSSHVWHRVAPELARGHTLYFYDLPGY CCCCCCEECCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCC GRSDKREGQDVSLGIQNKALAAMLAFWKLDRPQIIAHDFGGATALRAHLIDGCDYDRLLL CCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEE IDPVAVRPWGSPFVRHVRQHEAAFAGLPDYIQAAILKAYVSGAATRPLSDSDLEPYIAPW ECCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC TGSVGQPAFYRQIAQMDQRFTDEVEPLYGQLRCPVTLLWGEEDRWIPPQSGQKLAAMLPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCC CALTLVPGSGHLMQEDRPEAIVAAALRFFAG CEEEEECCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]