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The map label for this gene is aglF [H]

Identifier: 13474263

GI number: 13474263

Start: 4049940

End: 4050953

Strand: Reverse

Name: aglF [H]

Synonym: mll5112

Alternate gene names: 13474263

Gene position: 4050953-4049940 (Counterclockwise)

Preceding gene: 13474264

Following gene: 13474262

Centisome position: 57.57

GC content: 60.26

Gene sequence:

>1014_bases
ATGGCGTCTCAGATTTTCTCGGCCATTTTCGTCATCATTATCGGCGTCGGCGGCTGCGTCGCCTATTTCTGGGGCGCCAA
CAAACTGGTCGACGTGATATTCCCGTCACGCGGCGTCGCCGGCGCCGCGGCCATCGACAATCTTCGCCGGCAAGGCCTGG
TCCGGCCCTGGCTGTTCGTCGGACCGGCGATGATCATCCTGACCATCTATCTCATCTACCCCGTGGTCGAGACGCTGCGG
CTGTCCTTCCTCGATCGCGGCGGCGTCAACTTCGTCGGTCTGGCCAACTACCAATGGGCCTTCGGCGACCGTGAGTTCCG
CAACTCGATCCTCAACAACGTGTTGTGGCTGGCTGTCGTGCCCGCCGCCTGCACCTTCCTTGGCCTGATCATCGCCGTGC
TCACCGACAAGATCTGGTGGGGCACGATCGCCAAAAGCCTGATCTTCCTGCCGCTGGCCATCTCCTTCGTCGGCGCCAGC
GTGATCTGGAAATTCATCTACGAGTATCGCGGCGACGGCCAGACGCAGATCGGCATTCTCAACGCCATCATCCAGCATTT
CGGCGGTCAGCCGCAGGTCTGGATATCGCTGCCGTTCTGGAACAATTTCTTCCTGATGATCATCCTGATCTGGATCCAGA
CCGGCTTTGCCATGGTCATCCTGTCCTCGGCGCTGCGCGGCATTCCGGAAGAGACCCTGGAAGCCGCCGTGATCGACGGC
GCCAACTCGTTCCAGATCTTCTGGAAGATCATGGTGCCGCAGATCTGGGGCACCATCGCCGTGGTCTGGACCACAATCAC
CATCCTGGTGCTGAAAGTGTTCGACATCGTGCTGACCATGACCAACGGCCAGTGGAACAGCCAGGTGCTGGCCAATCTGA
TGTTCGACTGGATGTTCCGCGGCGGCGGCGATTTCGGCCGCGGCGCCACAATCGCCATCATCATCATGATCGCGGTCATT
CCGATCATGGTCTGGAACATCCGCCAGGCCAACAAAGAGACGGGAGGGCACTGA

Upstream 100 bases:

>100_bases
GAGACATTCTCCGCAGCCGATTTGCGCTCCAAACAACTGAATCGGCGCCTGGTCCCGGGGTCATGTCAGCCTCGCCGGAT
CATGCGCAGGGGAGGAATGC

Downstream 100 bases:

>100_bases
AATGGCCGTAGCGACCGGAAATTCCTTCGCCAGCCGCTTCGGCGTCCACATCGCGGTGCTGGTCTTCGTTGCCATCTGGA
CCATCCCGACGCTCGGCATC

Product: alpha-glucosides ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MASQIFSAIFVIIIGVGGCVAYFWGANKLVDVIFPSRGVAGAAAIDNLRRQGLVRPWLFVGPAMIILTIYLIYPVVETLR
LSFLDRGGVNFVGLANYQWAFGDREFRNSILNNVLWLAVVPAACTFLGLIIAVLTDKIWWGTIAKSLIFLPLAISFVGAS
VIWKFIYEYRGDGQTQIGILNAIIQHFGGQPQVWISLPFWNNFFLMIILIWIQTGFAMVILSSALRGIPEETLEAAVIDG
ANSFQIFWKIMVPQIWGTIAVVWTTITILVLKVFDIVLTMTNGQWNSQVLANLMFDWMFRGGGDFGRGATIAIIIMIAVI
PIMVWNIRQANKETGGH

Sequences:

>Translated_337_residues
MASQIFSAIFVIIIGVGGCVAYFWGANKLVDVIFPSRGVAGAAAIDNLRRQGLVRPWLFVGPAMIILTIYLIYPVVETLR
LSFLDRGGVNFVGLANYQWAFGDREFRNSILNNVLWLAVVPAACTFLGLIIAVLTDKIWWGTIAKSLIFLPLAISFVGAS
VIWKFIYEYRGDGQTQIGILNAIIQHFGGQPQVWISLPFWNNFFLMIILIWIQTGFAMVILSSALRGIPEETLEAAVIDG
ANSFQIFWKIMVPQIWGTIAVVWTTITILVLKVFDIVLTMTNGQWNSQVLANLMFDWMFRGGGDFGRGATIAIIIMIAVI
PIMVWNIRQANKETGGH
>Mature_336_residues
ASQIFSAIFVIIIGVGGCVAYFWGANKLVDVIFPSRGVAGAAAIDNLRRQGLVRPWLFVGPAMIILTIYLIYPVVETLRL
SFLDRGGVNFVGLANYQWAFGDREFRNSILNNVLWLAVVPAACTFLGLIIAVLTDKIWWGTIAKSLIFLPLAISFVGASV
IWKFIYEYRGDGQTQIGILNAIIQHFGGQPQVWISLPFWNNFFLMIILIWIQTGFAMVILSSALRGIPEETLEAAVIDGA
NSFQIFWKIMVPQIWGTIAVVWTTITILVLKVFDIVLTMTNGQWNSQVLANLMFDWMFRGGGDFGRGATIAIIIMIAVIP
IMVWNIRQANKETGGH

Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=265, Percent_Identity=25.6603773584906, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=25.5102040816327, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790465, Length=255, Percent_Identity=23.921568627451, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37480; Mature: 37349

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQIFSAIFVIIIGVGGCVAYFWGANKLVDVIFPSRGVAGAAAIDNLRRQGLVRPWLFV
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHCCCCCHHHHH
GPAMIILTIYLIYPVVETLRLSFLDRGGVNFVGLANYQWAFGDREFRNSILNNVLWLAVV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHH
PAACTFLGLIIAVLTDKIWWGTIAKSLIFLPLAISFVGASVIWKFIYEYRGDGQTQIGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
NAIIQHFGGQPQVWISLPFWNNFFLMIILIWIQTGFAMVILSSALRGIPEETLEAAVIDG
HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
ANSFQIFWKIMVPQIWGTIAVVWTTITILVLKVFDIVLTMTNGQWNSQVLANLMFDWMFR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GGGDFGRGATIAIIIMIAVIPIMVWNIRQANKETGGH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASQIFSAIFVIIIGVGGCVAYFWGANKLVDVIFPSRGVAGAAAIDNLRRQGLVRPWLFV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHCCCCCHHHHH
GPAMIILTIYLIYPVVETLRLSFLDRGGVNFVGLANYQWAFGDREFRNSILNNVLWLAVV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHH
PAACTFLGLIIAVLTDKIWWGTIAKSLIFLPLAISFVGASVIWKFIYEYRGDGQTQIGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
NAIIQHFGGQPQVWISLPFWNNFFLMIILIWIQTGFAMVILSSALRGIPEETLEAAVIDG
HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
ANSFQIFWKIMVPQIWGTIAVVWTTITILVLKVFDIVLTMTNGQWNSQVLANLMFDWMFR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
GGGDFGRGATIAIIIMIAVIPIMVWNIRQANKETGGH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]