| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is ybhG [C]
Identifier: 13473859
GI number: 13473859
Start: 3647070
End: 3648023
Strand: Direct
Name: ybhG [C]
Synonym: mlr4594
Alternate gene names: 13473859
Gene position: 3647070-3648023 (Clockwise)
Preceding gene: 13473858
Following gene: 13473860
Centisome position: 51.83
GC content: 68.34
Gene sequence:
>954_bases ATGAGTTTCCTCTGCTCCTTGCCGCTTGCCGCGAAGCTCCTCAGTGCCTGTGCGCCCGCCGCGCCACTCGCCGTCGGCTA TGTCGAGGGCGACTATGTGCTGCTGGCGCCGATCGAGGTGGCGCAGGTCGAGACCGTCGCCGTCAAGCGCGGCGATCGCG TCATGCCGGGCACGACGGTGGTGACGCTGGAAAGCGCCGACGCCAAGATCGCGGTGGCCCAGGCCGAGGCAAGCCTCGCC CAGGCGCAGGCGCAGCTCGCCGATCTGCAGGTCGGCAAGCGGCCGGAAGAGATCGCCGCACTCAAGGCGCAGGTCGACAT GGCCAAGGCGCAGGCCGACGACGCCAAGCGCAAATACGATCGCGCCGCCGACCTGTTCAAGCGCGGCACCGGCACGCAGG CCGATTACGACACCGCCTCGGCGACGCTGGAGACGGCCAACGCCCAGGTCGGCCAGGCGCAGGCCAATCTCGCCGTCGGC GGCCTGCCGGCGCGGCCCGAGACGATCAAGGCCGCCGACAATCAGGTCAAGCAGGCACAGGCAGCCCTGCAGCAGGCTCA GTGGCGGCTGTCCAAGCGCACGCTCGCCGCACCTTCGCCCGGCCGCGTCAACGATGTCATCCGCAATCCCGGCGACACGG CCGGTCCGACCGCGCCGGTCATTTCGATGCTGCCCGACGGCGCGGTGAAACTCAGCGTCTACATACCGGAGGCTGCCTTC TCTTCGGTCAGGATCGGCAGCCTGCTCAGCGTTCATTGCGACGGCTGTGGCGAGGGCGTGAAGGCGCGCGTCAGCTATGT CTCGCCCGATCCCGAATTCACTCCGCCGGTGATCTATTCGCTCGAGAACCGGCAGAAGCTGGTCTATCTGGTCGAGGCGC GGCCGGAGGGCGATGCCGGCCCGCTGCAGCCAGGCCAGATCGTCGATGTCGAGCTTGCGGAAACGGCAAAATGA
Upstream 100 bases:
>100_bases AGGTCGTGGCGGTCACCACGGACAATCTCAGCGCCATACTGGCCGCCCGAATGGGATCAAAACCCAAAATGGGATCAAAA CCCCCAATTGGATCAAAACA
Downstream 100 bases:
>100_bases ACGCCATCGACGTTCACGGCCTGGTCAAGCGGTTCGGCGACAAGACCGTCGTCGACCAAGTGACGATGTCGGTCGCCGAA GGCGAGATCGTCGGTTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSFLCSLPLAAKLLSACAPAAPLAVGYVEGDYVLLAPIEVAQVETVAVKRGDRVMPGTTVVTLESADAKIAVAQAEASLA QAQAQLADLQVGKRPEEIAALKAQVDMAKAQADDAKRKYDRAADLFKRGTGTQADYDTASATLETANAQVGQAQANLAVG GLPARPETIKAADNQVKQAQAALQQAQWRLSKRTLAAPSPGRVNDVIRNPGDTAGPTAPVISMLPDGAVKLSVYIPEAAF SSVRIGSLLSVHCDGCGEGVKARVSYVSPDPEFTPPVIYSLENRQKLVYLVEARPEGDAGPLQPGQIVDVELAETAK
Sequences:
>Translated_317_residues MSFLCSLPLAAKLLSACAPAAPLAVGYVEGDYVLLAPIEVAQVETVAVKRGDRVMPGTTVVTLESADAKIAVAQAEASLA QAQAQLADLQVGKRPEEIAALKAQVDMAKAQADDAKRKYDRAADLFKRGTGTQADYDTASATLETANAQVGQAQANLAVG GLPARPETIKAADNQVKQAQAALQQAQWRLSKRTLAAPSPGRVNDVIRNPGDTAGPTAPVISMLPDGAVKLSVYIPEAAF SSVRIGSLLSVHCDGCGEGVKARVSYVSPDPEFTPPVIYSLENRQKLVYLVEARPEGDAGPLQPGQIVDVELAETAK >Mature_316_residues SFLCSLPLAAKLLSACAPAAPLAVGYVEGDYVLLAPIEVAQVETVAVKRGDRVMPGTTVVTLESADAKIAVAQAEASLAQ AQAQLADLQVGKRPEEIAALKAQVDMAKAQADDAKRKYDRAADLFKRGTGTQADYDTASATLETANAQVGQAQANLAVGG LPARPETIKAADNQVKQAQAALQQAQWRLSKRTLAAPSPGRVNDVIRNPGDTAGPTAPVISMLPDGAVKLSVYIPEAAFS SVRIGSLLSVHCDGCGEGVKARVSYVSPDPEFTPPVIYSLENRQKLVYLVEARPEGDAGPLQPGQIVDVELAETAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=250, Percent_Identity=31.2, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789900, Length=282, Percent_Identity=24.822695035461, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 33122; Mature: 32991
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLCSLPLAAKLLSACAPAAPLAVGYVEGDYVLLAPIEVAQVETVAVKRGDRVMPGTTV CCCEECCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCHHHHEEEEEECCCCEECCCCEE VTLESADAKIAVAQAEASLAQAQAQLADLQVGKRPEEIAALKAQVDMAKAQADDAKRKYD EEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RAADLFKRGTGTQADYDTASATLETANAQVGQAQANLAVGGLPARPETIKAADNQVKQAQ HHHHHHHCCCCCCCCCCCHHHEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH AALQQAQWRLSKRTLAAPSPGRVNDVIRNPGDTAGPTAPVISMLPDGAVKLSVYIPEAAF HHHHHHHHHHHHHEECCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEEECCHHH SSVRIGSLLSVHCDGCGEGVKARVSYVSPDPEFTPPVIYSLENRQKLVYLVEARPEGDAG HHEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCCC PLQPGQIVDVELAETAK CCCCCCEEEEEECCCCC >Mature Secondary Structure SFLCSLPLAAKLLSACAPAAPLAVGYVEGDYVLLAPIEVAQVETVAVKRGDRVMPGTTV CCEECCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCHHHHEEEEEECCCCEECCCCEE VTLESADAKIAVAQAEASLAQAQAQLADLQVGKRPEEIAALKAQVDMAKAQADDAKRKYD EEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RAADLFKRGTGTQADYDTASATLETANAQVGQAQANLAVGGLPARPETIKAADNQVKQAQ HHHHHHHCCCCCCCCCCCHHHEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH AALQQAQWRLSKRTLAAPSPGRVNDVIRNPGDTAGPTAPVISMLPDGAVKLSVYIPEAAF HHHHHHHHHHHHHEECCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEEECCHHH SSVRIGSLLSVHCDGCGEGVKARVSYVSPDPEFTPPVIYSLENRQKLVYLVEARPEGDAG HHEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCCC PLQPGQIVDVELAETAK CCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA