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The map label for this gene is rlpA [C]

Identifier: 13473828

GI number: 13473828

Start: 3619606

End: 3619974

Strand: Reverse

Name: rlpA [C]

Synonym: mll4553

Alternate gene names: 13473828

Gene position: 3619974-3619606 (Counterclockwise)

Preceding gene: 13473830

Following gene: 13473827

Centisome position: 51.45

GC content: 66.94

Gene sequence:

>369_bases
ATGAAGACCCTAAACCAGACCGCGCTTGTCGCGGTAACGATCGCTGCTGGCCTGATGGTCGGCGCTTCCGCCACTTCGGC
AACCGCCGCCGCTGGCCAGTGTGGCCGTGCTTCCTGGTACGCACTGCACTCGCGCACCGCATCGGGCGAGCGCATGAACC
CGTCGGCGTTGACCGCCGCCCACCGCACGCTGCCGTTCGGCACCAAATTGCGGGTCACCAACCAGAACAATGGCCGCAGC
GTCATCGTGCGCATCAACGATCGCGGCCCGTTCATCCGGGGTCGCGTGCTCGACCTGTCGAAGGGCGCCGCCGGCCAGCT
CGGCTTCATCGGTTCCGGCCATACCTCGGTCTGCATGGCGCGGGTTTGA

Upstream 100 bases:

>100_bases
GTGTGATCTCGCCACGGAACGGACAGATGCTTGCCGCATTTCCTGCCTTATTCGGCACCTAACGGCTGGGGTCTGTCAAA
AACGGAGCCACCCGTCAAAT

Downstream 100 bases:

>100_bases
TATTATTTTCCCTGGACCATGATCTCTGCCGAACCGCAGGTCAGCGAAGGAAAAACCGGAACCACTTTTCGGGATCATGG
TCTGGTGTCCCAGCAGCGGA

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKTLNQTALVAVTIAAGLMVGASATSATAAAGQCGRASWYALHSRTASGERMNPSALTAAHRTLPFGTKLRVTNQNNGRS
VIVRINDRGPFIRGRVLDLSKGAAGQLGFIGSGHTSVCMARV

Sequences:

>Translated_122_residues
MKTLNQTALVAVTIAAGLMVGASATSATAAAGQCGRASWYALHSRTASGERMNPSALTAAHRTLPFGTKLRVTNQNNGRS
VIVRINDRGPFIRGRVLDLSKGAAGQLGFIGSGHTSVCMARV
>Mature_122_residues
MKTLNQTALVAVTIAAGLMVGASATSATAAAGQCGRASWYALHSRTASGERMNPSALTAAHRTLPFGTKLRVTNQNNGRS
VIVRINDRGPFIRGRVLDLSKGAAGQLGFIGSGHTSVCMARV

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=78, Percent_Identity=50, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 12624; Mature: 12624

Theoretical pI: Translated: 12.27; Mature: 12.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLNQTALVAVTIAAGLMVGASATSATAAAGQCGRASWYALHSRTASGERMNPSALTAA
CCCCCCHHHHHHEEHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
HRTLPFGTKLRVTNQNNGRSVIVRINDRGPFIRGRVLDLSKGAAGQLGFIGSGHTSVCMA
HHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEE
RV
EC
>Mature Secondary Structure
MKTLNQTALVAVTIAAGLMVGASATSATAAAGQCGRASWYALHSRTASGERMNPSALTAA
CCCCCCHHHHHHEEHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
HRTLPFGTKLRVTNQNNGRSVIVRINDRGPFIRGRVLDLSKGAAGQLGFIGSGHTSVCMA
HHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEE
RV
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]