| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473812
Identifier: 13473812
GI number: 13473812
Start: 3603298
End: 3604038
Strand: Reverse
Name: 13473812
Synonym: mll4533
Alternate gene names: NA
Gene position: 3604038-3603298 (Counterclockwise)
Preceding gene: 13473813
Following gene: 13473811
Centisome position: 51.22
GC content: 69.37
Gene sequence:
>741_bases ATGACCGGCGCATCTGAGCGCCGTCCCACACGGAGCCAGCCGATGCCGAGAGCCTCAAAGTTCATTGCCCTGTCCAGCCT GGGGGCGCTGGCGCTCGCCGCCTCGCTCGGTGCCGCCGCCGCGCAGCCGCTCAGCGTCGTCGAGCTGTTCACCAGCCAGG GCTGCTCGTCCTGCCCGCCGGCCAATGCCAATCTCATCAAGGTCAAGGACCAGCCCGGCGTGCTGGCGCTGTCCTTCAAC GTCACCTACTGGGACTATCTCGGCTGGAAGGACACTTTCGGCAGGCAGGAATTCACCCAGCGCCAGGTTTCCTACGAGCC GCCGCTCGGCCATGACGGGCCGTTCACGCCGCAAGTCGTGGTCAACGGCCATGCCGATGTCGTCGGCGCCGCACCCGGCG AGATCGAGCAGCTGATTTCGGCAACCGGCAAGACCGGCGGCCCCTCGCTGTCGCTCGAGGGCGGCAAGGTCGCGATCGGC GCAGGTGCTGCACCGGGCGGCAAGGCCGATGTCTGGCTGGTGCGCTATGCCAAGGGCGTCGTGCAGGTGCCGGTGGCGCG CGGCGAAAACACCGGCCGCACGCTGCCGCACGCCAATGTCGTGCACGCGCTGGAAAAACTCGGCAGCTGGACCGGCGACG CCACTTCCTATGCGCTGCCCGCCGCCGCGAGCGGCTTGAGCACCGCCGTGCTGGTGCAATCGCCGGGCGGCGGACCGATC CTGGCCGCCGCCACCAACTGA
Upstream 100 bases:
>100_bases TTCCTTCTCCCCTTGTGGGAGAAGGTGTCGCCGAACTTCAGCCTTTATCACAAACCGGTGAGCGCTGTAACGAAGCGGCA AATGGCAGCGAAGTGGGGGA
Downstream 100 bases:
>100_bases TTTTTCTTTCTCTTCGCGCGGGGCCGCATGCAGCGGCAACGCATCACCCGGCCCGCTTGCGCGCGCCAAACCCAAGGAGA CTCCTAGTGACCAAGTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTGASERRPTRSQPMPRASKFIALSSLGALALAASLGAAAAQPLSVVELFTSQGCSSCPPANANLIKVKDQPGVLALSFN VTYWDYLGWKDTFGRQEFTQRQVSYEPPLGHDGPFTPQVVVNGHADVVGAAPGEIEQLISATGKTGGPSLSLEGGKVAIG AGAAPGGKADVWLVRYAKGVVQVPVARGENTGRTLPHANVVHALEKLGSWTGDATSYALPAAASGLSTAVLVQSPGGGPI LAAATN
Sequences:
>Translated_246_residues MTGASERRPTRSQPMPRASKFIALSSLGALALAASLGAAAAQPLSVVELFTSQGCSSCPPANANLIKVKDQPGVLALSFN VTYWDYLGWKDTFGRQEFTQRQVSYEPPLGHDGPFTPQVVVNGHADVVGAAPGEIEQLISATGKTGGPSLSLEGGKVAIG AGAAPGGKADVWLVRYAKGVVQVPVARGENTGRTLPHANVVHALEKLGSWTGDATSYALPAAASGLSTAVLVQSPGGGPI LAAATN >Mature_245_residues TGASERRPTRSQPMPRASKFIALSSLGALALAASLGAAAAQPLSVVELFTSQGCSSCPPANANLIKVKDQPGVLALSFNV TYWDYLGWKDTFGRQEFTQRQVSYEPPLGHDGPFTPQVVVNGHADVVGAAPGEIEQLISATGKTGGPSLSLEGGKVAIGA GAAPGGKADVWLVRYAKGVVQVPVARGENTGRTLPHANVVHALEKLGSWTGDATSYALPAAASGLSTAVLVQSPGGGPIL AAATN
Specific function: Unknown
COG id: COG5429
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25051; Mature: 24919
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGASERRPTRSQPMPRASKFIALSSLGALALAASLGAAAAQPLSVVELFTSQGCSSCPP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC ANANLIKVKDQPGVLALSFNVTYWDYLGWKDTFGRQEFTQRQVSYEPPLGHDGPFTPQVV CCCCEEEEECCCCEEEEEEECEEEECCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEE VNGHADVVGAAPGEIEQLISATGKTGGPSLSLEGGKVAIGAGAAPGGKADVWLVRYAKGV ECCCCCEEECCCHHHHHHHHHCCCCCCCEEEECCCEEEEECCCCCCCCCCEEEEEECCCE VQVPVARGENTGRTLPHANVVHALEKLGSWTGDATSYALPAAASGLSTAVLVQSPGGGPI EEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCHHCCCCEEEEEEECCCCCEE LAAATN EEEECC >Mature Secondary Structure TGASERRPTRSQPMPRASKFIALSSLGALALAASLGAAAAQPLSVVELFTSQGCSSCPP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC ANANLIKVKDQPGVLALSFNVTYWDYLGWKDTFGRQEFTQRQVSYEPPLGHDGPFTPQVV CCCCEEEEECCCCEEEEEEECEEEECCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEE VNGHADVVGAAPGEIEQLISATGKTGGPSLSLEGGKVAIGAGAAPGGKADVWLVRYAKGV ECCCCCEEECCCHHHHHHHHHCCCCCCCEEEECCCEEEEECCCCCCCCCCEEEEEECCCE VQVPVARGENTGRTLPHANVVHALEKLGSWTGDATSYALPAAASGLSTAVLVQSPGGGPI EEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCHHCCCCEEEEEEECCCCCEE LAAATN EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA