| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473771
Identifier: 13473771
GI number: 13473771
Start: 3560380
End: 3561009
Strand: Reverse
Name: 13473771
Synonym: mll4476
Alternate gene names: NA
Gene position: 3561009-3560380 (Counterclockwise)
Preceding gene: 13473772
Following gene: 13473769
Centisome position: 50.61
GC content: 62.54
Gene sequence:
>630_bases GTGCAAATGGCCGTCCGTTGGCAATTGTCCGGAAGCTACTTCGAAAATTGCAGCTGCGATGTCGTGTGTCCGTGCCTGCT GTCCACCAAGGCGCAGCTGACATCGAGGCCGACCAAAGGCGTTTGCGACGTCGGTCTGGTCTTTCATATCGATACGGGCA ATTACGGCGACGTTCGATTGGACGGGCTGAGTGTCGCGCTGGTCGCTCACACGCCGGGCCCGATGGCAGACGGCAATTGG ACAGCCGCCGCCTATATCGACGAACGGGCCGATGACAGGCAGACAGAGGCGCTGGGCGCCATCTTCACTGGCGCCGCGGG CGGCCCCATGGCGGTGTTGGCACCCATGATCGGCACGAATCTCGGCGCCAAGAAGGTGCCGATAGACTACCGGATAGACG GCAAAAAGCGATCAGCGGCGATCGCCGGGGTCATGCAGATGGCGGTCGAGCCGCTGCCGACAATGCGCGAAGACGGGCAG ATGTGGGCGGCCACCGGCCATCCCGTCAATCCCGACTGGCTCGGCATGGCGATGGGGGCGCAAGGCAGTACATTCAGCGA CCATGGCATGAGCTGGGACAATTCCGGCCAAAACGGACATTACGCCCCGATCAATTGGTCCGGCGAGTAG
Upstream 100 bases:
>100_bases GCCGGCCAATCGCGGCGGGGGCTATTTGCCATTCCTGCACTAGTCGTGAAATGGCACCGCCTCGCCAAAGTGATATGCCG ACGCGCCTGACGCATGGGAG
Downstream 100 bases:
>100_bases CACGGGAGGATCGCTGGCCTAACGCTGCCCCAGCCTCGCGCTCTCCACCGCAATGCCGAGCAGCGCCTGGCGCGCCAGCG CCTCTGACAGATCGGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MQMAVRWQLSGSYFENCSCDVVCPCLLSTKAQLTSRPTKGVCDVGLVFHIDTGNYGDVRLDGLSVALVAHTPGPMADGNW TAAAYIDERADDRQTEALGAIFTGAAGGPMAVLAPMIGTNLGAKKVPIDYRIDGKKRSAAIAGVMQMAVEPLPTMREDGQ MWAATGHPVNPDWLGMAMGAQGSTFSDHGMSWDNSGQNGHYAPINWSGE
Sequences:
>Translated_209_residues MQMAVRWQLSGSYFENCSCDVVCPCLLSTKAQLTSRPTKGVCDVGLVFHIDTGNYGDVRLDGLSVALVAHTPGPMADGNW TAAAYIDERADDRQTEALGAIFTGAAGGPMAVLAPMIGTNLGAKKVPIDYRIDGKKRSAAIAGVMQMAVEPLPTMREDGQ MWAATGHPVNPDWLGMAMGAQGSTFSDHGMSWDNSGQNGHYAPINWSGE >Mature_209_residues MQMAVRWQLSGSYFENCSCDVVCPCLLSTKAQLTSRPTKGVCDVGLVFHIDTGNYGDVRLDGLSVALVAHTPGPMADGNW TAAAYIDERADDRQTEALGAIFTGAAGGPMAVLAPMIGTNLGAKKVPIDYRIDGKKRSAAIAGVMQMAVEPLPTMREDGQ MWAATGHPVNPDWLGMAMGAQGSTFSDHGMSWDNSGQNGHYAPINWSGE
Specific function: Unknown
COG id: COG5588
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22164; Mature: 22164
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMAVRWQLSGSYFENCSCDVVCPCLLSTKAQLTSRPTKGVCDVGLVFHIDTGNYGDVRL CCEEEEEEECCCCCCCCCCCEEEHHHHCCHHHHHCCCCCCCEEEEEEEEECCCCCCCEEE DGLSVALVAHTPGPMADGNWTAAAYIDERADDRQTEALGAIFTGAAGGPMAVLAPMIGTN CCEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHEEECCCCCCHHHHHHHHCCC LGAKKVPIDYRIDGKKRSAAIAGVMQMAVEPLPTMREDGQMWAATGHPVNPDWLGMAMGA CCCEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEECC QGSTFSDHGMSWDNSGQNGHYAPINWSGE CCCCCCCCCCCCCCCCCCCCEECEECCCC >Mature Secondary Structure MQMAVRWQLSGSYFENCSCDVVCPCLLSTKAQLTSRPTKGVCDVGLVFHIDTGNYGDVRL CCEEEEEEECCCCCCCCCCCEEEHHHHCCHHHHHCCCCCCCEEEEEEEEECCCCCCCEEE DGLSVALVAHTPGPMADGNWTAAAYIDERADDRQTEALGAIFTGAAGGPMAVLAPMIGTN CCEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHEEECCCCCCHHHHHHHHCCC LGAKKVPIDYRIDGKKRSAAIAGVMQMAVEPLPTMREDGQMWAATGHPVNPDWLGMAMGA CCCEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEECC QGSTFSDHGMSWDNSGQNGHYAPINWSGE CCCCCCCCCCCCCCCCCCCCEECEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA