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The map label for this gene is yjgF [C]

Identifier: 13473751

GI number: 13473751

Start: 3539928

End: 3540326

Strand: Reverse

Name: yjgF [C]

Synonym: mll4450

Alternate gene names: 13473751

Gene position: 3540326-3539928 (Counterclockwise)

Preceding gene: 13473753

Following gene: 161621450

Centisome position: 50.32

GC content: 65.16

Gene sequence:

>399_bases
GTGCCCTGTCGCGTCGTCAGAGGAGCCAATCCCTTGCCCAAGCAGACTTTTGGAACATCCCATGTGCCGCTGTCGCCCGC
CGTGCGGGCCGGCGACTTCGTCTATGTCTCTGGCCAGGTTCCGGTCGGCAGCGACGGCATCGTGGTGAAAGGCGGCATCA
CGGAACAGACCGAGCAGGTGCTCGCCAATGTGAAGGCGGCGCTGGCCTTGGCCGGCTGTACGCTGGACGACGTGGTGAAG
ACCACCGTCTGGCTGGGAGACGCGCGCGATTTCGGCGCCTTCAACGCGGTCTACGCCAGGCATTTCCCGAAGAACCCGCC
GGCCCGCACCACGGTCGAATCGCGGCTGATGATCGACATCAAGATCGAGGTCGAGGCGGTCGCCTACAGGCCCGTCTAG

Upstream 100 bases:

>100_bases
AAGCAACACGGATTTTTCTGAAGAATGTTGCTTTCCAACAAGAGCCCTATCGGGACCGGCCCGATCGGGATAAATCTGCG
CGGAAGTGGGCGCCGCCCTG

Downstream 100 bases:

>100_bases
GACGGCAACGCAGAAAACCGGAGGTTCCCAAAATGCAATTCGACCTCCTGCTGAAGGGCGGACGCCTGATCGATCCGGCG
TCCGGCATCGACGCGCCACG

Product: translation initiation inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MPCRVVRGANPLPKQTFGTSHVPLSPAVRAGDFVYVSGQVPVGSDGIVVKGGITEQTEQVLANVKAALALAGCTLDDVVK
TTVWLGDARDFGAFNAVYARHFPKNPPARTTVESRLMIDIKIEVEAVAYRPV

Sequences:

>Translated_132_residues
MPCRVVRGANPLPKQTFGTSHVPLSPAVRAGDFVYVSGQVPVGSDGIVVKGGITEQTEQVLANVKAALALAGCTLDDVVK
TTVWLGDARDFGAFNAVYARHFPKNPPARTTVESRLMIDIKIEVEAVAYRPV
>Mature_131_residues
PCRVVRGANPLPKQTFGTSHVPLSPAVRAGDFVYVSGQVPVGSDGIVVKGGITEQTEQVLANVKAALALAGCTLDDVVKT
TVWLGDARDFGAFNAVYARHFPKNPPARTTVESRLMIDIKIEVEAVAYRPV

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=110, Percent_Identity=40.9090909090909, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87082396, Length=125, Percent_Identity=39.2, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI87082213, Length=112, Percent_Identity=35.7142857142857, Blast_Score=72, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25148896, Length=134, Percent_Identity=35.8208955223881, Blast_Score=73, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71982075, Length=107, Percent_Identity=41.1214953271028, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982068, Length=107, Percent_Identity=41.1214953271028, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322138, Length=105, Percent_Identity=44.7619047619048, Blast_Score=101, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6320899, Length=102, Percent_Identity=37.2549019607843, Blast_Score=85, Evalue=4e-18,
Organism=Drosophila melanogaster, GI19921376, Length=108, Percent_Identity=42.5925925925926, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14075; Mature: 13944

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCRVVRGANPLPKQTFGTSHVPLSPAVRAGDFVYVSGQVPVGSDGIVVKGGITEQTEQV
CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCHHHHHH
LANVKAALALAGCTLDDVVKTTVWLGDARDFGAFNAVYARHFPKNPPARTTVESRLMIDI
HHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCCCCCEECCEEEEEE
KIEVEAVAYRPV
EEEEEEEEECCC
>Mature Secondary Structure 
PCRVVRGANPLPKQTFGTSHVPLSPAVRAGDFVYVSGQVPVGSDGIVVKGGITEQTEQV
CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCHHHHHH
LANVKAALALAGCTLDDVVKTTVWLGDARDFGAFNAVYARHFPKNPPARTTVESRLMIDI
HHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCHHHHHHHCCCCCCCCCCEECCEEEEEE
KIEVEAVAYRPV
EEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]