Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473724

Identifier: 13473724

GI number: 13473724

Start: 3501772

End: 3503181

Strand: Reverse

Name: 13473724

Synonym: mll4420

Alternate gene names: NA

Gene position: 3503181-3501772 (Counterclockwise)

Preceding gene: 13473725

Following gene: 13473723

Centisome position: 49.79

GC content: 65.11

Gene sequence:

>1410_bases
ATGGCCGCTGCCGTGGTGGCCGTGCATCCCACGGCCTTCAGCGACATCAGGGTCTGGCTCAAGCCCGCCGCCTTGCTTGT
CGCGCTGCTGCCGCTCGCCGAAAATGTCAGCCCTCTGTCCGTCTCGATCGCGCTTGCGGCGCTGGTCGTCTTCGCGCTTT
CGCTCAGCGGCCGGCTGCGGCACGGCATGGCGTGCATTGCCGGCCAGATCGCGCTGTTCCTGCTGGTGGCGCCGCTGCGG
TTCGTTCGCGATTTCATCCGCTGGCGCAAGACGGCGCGCCGGTTGGGCGGGCGACGCGTGCGGCTGGCGGCGATCACGGT
CTGGGTGATGCCGCTGACGCTGGGCGCCGTCTTCCTGGCGCTGTTCGGCGCCGCCAATCCGGTCATCGACTACTGGCTGT
CGCTGATCGATCTTCTAAAACTGCTCGATCTCATCCAGCTGGCGCGGATCGCCTTCTGGCTGTTCGCGCTCGCCGGCGTC
TGGGCGTTTCTGCGGCCGCGCCTGCCGCGTTTTTCGCGGCGCATCTCCCGGCCACCCCTTGCCGCTGCCCGACCAGCGAT
CCATGCGCAAAGGCACGTCATCGAGGACATCGTGTTCGGCAAGGCCGCCATCCTGCGCGCGCTGATCGTCTTCAACGTGC
TGTTTGCGCTTCAGACCGGGCTGGATGCCACCTATCTGTGGGGCGGGGTCGCCCTTCCCGATGGCTTGAGCTACGCCGCC
TATGCGCATCGCGGCGCCTATCCCCTGATTGTTACCGCGCTGCTCGCCGCCGGCTTTGTGCTGGCGGCGCTGCGGCCCGG
CAATGAAACGTCCAAAGATCCGCTCATCCGCCGGCTGGTCTATGCCTGGGTGGCGCAGAACATCATGCTGGTCATCTCGT
CGATCCTGCGGCTCGACCTCTATGTCGGCATCTATGCGCTGACCTACTGGCGCATCGCCGCTTTTGTCTGGATGGGGCTG
GTGGCGGCAGGGCTTGCGCTGATCGTCGCCCGCATCGCGCTCGGAAAATCCAATGAATGGCTCTCCTCCGCCAATCTTCT
GACGTTATCTCTGACGCTTTATGCCTGCTGTTTCATCAATTTCGCCGCGACGATCGCCAATTACAATGTCGACCATTCCC
TCGAAATGACCGGCCAGGGTATTCCCCTCGACGCCTGGTACCTGCGCTCGCTCGGCCCGGGCGCGTTTCCGGCGCTCGAT
CGTTTCTTCGATCGTCAGGGCAAGACCCCCGACGCCGGCGCCACACGCGAACTTGTGAGACTGCGTGGCATCGACGAGGG
TTGGTACCGAACCGTCCAGGCAAACTGGCGGGCCTGGAGCTTTCGCGACTGGCGCCTGCTTGGCTATCTCGACAGCAGGG
GGTCGCTCGTGCTTCCTCAGCCTTCGCAACCTTCCTTGCCGGGCCGCTGA

Upstream 100 bases:

>100_bases
TTGCAGCCGCTTCGGTGTTGCCGTGCTGCTGGTCGTGCTGGCGGATTTCCTGTTCTACGGCCAGCCCGCCGGCATCACGG
TGTTCCTGTTCGCCATCCTG

Downstream 100 bases:

>100_bases
CCGATGCCGCATCACATCCTCGTCGCCGACGATGACCCGCATATCCGCGAGGTGATCTGCTTCGCGCTGGAAAAGGCCGG
CATGAAGACGCTTGGGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MAAAVVAVHPTAFSDIRVWLKPAALLVALLPLAENVSPLSVSIALAALVVFALSLSGRLRHGMACIAGQIALFLLVAPLR
FVRDFIRWRKTARRLGGRRVRLAAITVWVMPLTLGAVFLALFGAANPVIDYWLSLIDLLKLLDLIQLARIAFWLFALAGV
WAFLRPRLPRFSRRISRPPLAAARPAIHAQRHVIEDIVFGKAAILRALIVFNVLFALQTGLDATYLWGGVALPDGLSYAA
YAHRGAYPLIVTALLAAGFVLAALRPGNETSKDPLIRRLVYAWVAQNIMLVISSILRLDLYVGIYALTYWRIAAFVWMGL
VAAGLALIVARIALGKSNEWLSSANLLTLSLTLYACCFINFAATIANYNVDHSLEMTGQGIPLDAWYLRSLGPGAFPALD
RFFDRQGKTPDAGATRELVRLRGIDEGWYRTVQANWRAWSFRDWRLLGYLDSRGSLVLPQPSQPSLPGR

Sequences:

>Translated_469_residues
MAAAVVAVHPTAFSDIRVWLKPAALLVALLPLAENVSPLSVSIALAALVVFALSLSGRLRHGMACIAGQIALFLLVAPLR
FVRDFIRWRKTARRLGGRRVRLAAITVWVMPLTLGAVFLALFGAANPVIDYWLSLIDLLKLLDLIQLARIAFWLFALAGV
WAFLRPRLPRFSRRISRPPLAAARPAIHAQRHVIEDIVFGKAAILRALIVFNVLFALQTGLDATYLWGGVALPDGLSYAA
YAHRGAYPLIVTALLAAGFVLAALRPGNETSKDPLIRRLVYAWVAQNIMLVISSILRLDLYVGIYALTYWRIAAFVWMGL
VAAGLALIVARIALGKSNEWLSSANLLTLSLTLYACCFINFAATIANYNVDHSLEMTGQGIPLDAWYLRSLGPGAFPALD
RFFDRQGKTPDAGATRELVRLRGIDEGWYRTVQANWRAWSFRDWRLLGYLDSRGSLVLPQPSQPSLPGR
>Mature_468_residues
AAAVVAVHPTAFSDIRVWLKPAALLVALLPLAENVSPLSVSIALAALVVFALSLSGRLRHGMACIAGQIALFLLVAPLRF
VRDFIRWRKTARRLGGRRVRLAAITVWVMPLTLGAVFLALFGAANPVIDYWLSLIDLLKLLDLIQLARIAFWLFALAGVW
AFLRPRLPRFSRRISRPPLAAARPAIHAQRHVIEDIVFGKAAILRALIVFNVLFALQTGLDATYLWGGVALPDGLSYAAY
AHRGAYPLIVTALLAAGFVLAALRPGNETSKDPLIRRLVYAWVAQNIMLVISSILRLDLYVGIYALTYWRIAAFVWMGLV
AAGLALIVARIALGKSNEWLSSANLLTLSLTLYACCFINFAATIANYNVDHSLEMTGQGIPLDAWYLRSLGPGAFPALDR
FFDRQGKTPDAGATRELVRLRGIDEGWYRTVQANWRAWSFRDWRLLGYLDSRGSLVLPQPSQPSLPGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51684; Mature: 51553

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAVVAVHPTAFSDIRVWLKPAALLVALLPLAENVSPLSVSIALAALVVFALSLSGRLR
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
HGMACIAGQIALFLLVAPLRFVRDFIRWRKTARRLGGRRVRLAAITVWVMPLTLGAVFLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH
LFGAANPVIDYWLSLIDLLKLLDLIQLARIAFWLFALAGVWAFLRPRLPRFSRRISRPPL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
AAARPAIHAQRHVIEDIVFGKAAILRALIVFNVLFALQTGLDATYLWGGVALPDGLSYAA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCCCCCHHH
YAHRGAYPLIVTALLAAGFVLAALRPGNETSKDPLIRRLVYAWVAQNIMLVISSILRLDL
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGIYALTYWRIAAFVWMGLVAAGLALIVARIALGKSNEWLSSANLLTLSLTLYACCFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHH
FAATIANYNVDHSLEMTGQGIPLDAWYLRSLGPGAFPALDRFFDRQGKTPDAGATRELVR
HHHHHHCCCCCCCEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
LRGIDEGWYRTVQANWRAWSFRDWRLLGYLDSRGSLVLPQPSQPSLPGR
HHCCCHHHHHHHCCCCCEECCCCEEEEEEECCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
AAAVVAVHPTAFSDIRVWLKPAALLVALLPLAENVSPLSVSIALAALVVFALSLSGRLR
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH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HHCCCHHHHHHHCCCCCEECCCCEEEEEEECCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA