| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473724
Identifier: 13473724
GI number: 13473724
Start: 3501772
End: 3503181
Strand: Reverse
Name: 13473724
Synonym: mll4420
Alternate gene names: NA
Gene position: 3503181-3501772 (Counterclockwise)
Preceding gene: 13473725
Following gene: 13473723
Centisome position: 49.79
GC content: 65.11
Gene sequence:
>1410_bases ATGGCCGCTGCCGTGGTGGCCGTGCATCCCACGGCCTTCAGCGACATCAGGGTCTGGCTCAAGCCCGCCGCCTTGCTTGT CGCGCTGCTGCCGCTCGCCGAAAATGTCAGCCCTCTGTCCGTCTCGATCGCGCTTGCGGCGCTGGTCGTCTTCGCGCTTT CGCTCAGCGGCCGGCTGCGGCACGGCATGGCGTGCATTGCCGGCCAGATCGCGCTGTTCCTGCTGGTGGCGCCGCTGCGG TTCGTTCGCGATTTCATCCGCTGGCGCAAGACGGCGCGCCGGTTGGGCGGGCGACGCGTGCGGCTGGCGGCGATCACGGT CTGGGTGATGCCGCTGACGCTGGGCGCCGTCTTCCTGGCGCTGTTCGGCGCCGCCAATCCGGTCATCGACTACTGGCTGT CGCTGATCGATCTTCTAAAACTGCTCGATCTCATCCAGCTGGCGCGGATCGCCTTCTGGCTGTTCGCGCTCGCCGGCGTC TGGGCGTTTCTGCGGCCGCGCCTGCCGCGTTTTTCGCGGCGCATCTCCCGGCCACCCCTTGCCGCTGCCCGACCAGCGAT CCATGCGCAAAGGCACGTCATCGAGGACATCGTGTTCGGCAAGGCCGCCATCCTGCGCGCGCTGATCGTCTTCAACGTGC TGTTTGCGCTTCAGACCGGGCTGGATGCCACCTATCTGTGGGGCGGGGTCGCCCTTCCCGATGGCTTGAGCTACGCCGCC TATGCGCATCGCGGCGCCTATCCCCTGATTGTTACCGCGCTGCTCGCCGCCGGCTTTGTGCTGGCGGCGCTGCGGCCCGG CAATGAAACGTCCAAAGATCCGCTCATCCGCCGGCTGGTCTATGCCTGGGTGGCGCAGAACATCATGCTGGTCATCTCGT CGATCCTGCGGCTCGACCTCTATGTCGGCATCTATGCGCTGACCTACTGGCGCATCGCCGCTTTTGTCTGGATGGGGCTG GTGGCGGCAGGGCTTGCGCTGATCGTCGCCCGCATCGCGCTCGGAAAATCCAATGAATGGCTCTCCTCCGCCAATCTTCT GACGTTATCTCTGACGCTTTATGCCTGCTGTTTCATCAATTTCGCCGCGACGATCGCCAATTACAATGTCGACCATTCCC TCGAAATGACCGGCCAGGGTATTCCCCTCGACGCCTGGTACCTGCGCTCGCTCGGCCCGGGCGCGTTTCCGGCGCTCGAT CGTTTCTTCGATCGTCAGGGCAAGACCCCCGACGCCGGCGCCACACGCGAACTTGTGAGACTGCGTGGCATCGACGAGGG TTGGTACCGAACCGTCCAGGCAAACTGGCGGGCCTGGAGCTTTCGCGACTGGCGCCTGCTTGGCTATCTCGACAGCAGGG GGTCGCTCGTGCTTCCTCAGCCTTCGCAACCTTCCTTGCCGGGCCGCTGA
Upstream 100 bases:
>100_bases TTGCAGCCGCTTCGGTGTTGCCGTGCTGCTGGTCGTGCTGGCGGATTTCCTGTTCTACGGCCAGCCCGCCGGCATCACGG TGTTCCTGTTCGCCATCCTG
Downstream 100 bases:
>100_bases CCGATGCCGCATCACATCCTCGTCGCCGACGATGACCCGCATATCCGCGAGGTGATCTGCTTCGCGCTGGAAAAGGCCGG CATGAAGACGCTTGGGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MAAAVVAVHPTAFSDIRVWLKPAALLVALLPLAENVSPLSVSIALAALVVFALSLSGRLRHGMACIAGQIALFLLVAPLR FVRDFIRWRKTARRLGGRRVRLAAITVWVMPLTLGAVFLALFGAANPVIDYWLSLIDLLKLLDLIQLARIAFWLFALAGV WAFLRPRLPRFSRRISRPPLAAARPAIHAQRHVIEDIVFGKAAILRALIVFNVLFALQTGLDATYLWGGVALPDGLSYAA YAHRGAYPLIVTALLAAGFVLAALRPGNETSKDPLIRRLVYAWVAQNIMLVISSILRLDLYVGIYALTYWRIAAFVWMGL VAAGLALIVARIALGKSNEWLSSANLLTLSLTLYACCFINFAATIANYNVDHSLEMTGQGIPLDAWYLRSLGPGAFPALD RFFDRQGKTPDAGATRELVRLRGIDEGWYRTVQANWRAWSFRDWRLLGYLDSRGSLVLPQPSQPSLPGR
Sequences:
>Translated_469_residues MAAAVVAVHPTAFSDIRVWLKPAALLVALLPLAENVSPLSVSIALAALVVFALSLSGRLRHGMACIAGQIALFLLVAPLR FVRDFIRWRKTARRLGGRRVRLAAITVWVMPLTLGAVFLALFGAANPVIDYWLSLIDLLKLLDLIQLARIAFWLFALAGV WAFLRPRLPRFSRRISRPPLAAARPAIHAQRHVIEDIVFGKAAILRALIVFNVLFALQTGLDATYLWGGVALPDGLSYAA YAHRGAYPLIVTALLAAGFVLAALRPGNETSKDPLIRRLVYAWVAQNIMLVISSILRLDLYVGIYALTYWRIAAFVWMGL VAAGLALIVARIALGKSNEWLSSANLLTLSLTLYACCFINFAATIANYNVDHSLEMTGQGIPLDAWYLRSLGPGAFPALD RFFDRQGKTPDAGATRELVRLRGIDEGWYRTVQANWRAWSFRDWRLLGYLDSRGSLVLPQPSQPSLPGR >Mature_468_residues AAAVVAVHPTAFSDIRVWLKPAALLVALLPLAENVSPLSVSIALAALVVFALSLSGRLRHGMACIAGQIALFLLVAPLRF VRDFIRWRKTARRLGGRRVRLAAITVWVMPLTLGAVFLALFGAANPVIDYWLSLIDLLKLLDLIQLARIAFWLFALAGVW AFLRPRLPRFSRRISRPPLAAARPAIHAQRHVIEDIVFGKAAILRALIVFNVLFALQTGLDATYLWGGVALPDGLSYAAY AHRGAYPLIVTALLAAGFVLAALRPGNETSKDPLIRRLVYAWVAQNIMLVISSILRLDLYVGIYALTYWRIAAFVWMGLV AAGLALIVARIALGKSNEWLSSANLLTLSLTLYACCFINFAATIANYNVDHSLEMTGQGIPLDAWYLRSLGPGAFPALDR FFDRQGKTPDAGATRELVRLRGIDEGWYRTVQANWRAWSFRDWRLLGYLDSRGSLVLPQPSQPSLPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51684; Mature: 51553
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAVVAVHPTAFSDIRVWLKPAALLVALLPLAENVSPLSVSIALAALVVFALSLSGRLR CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH HGMACIAGQIALFLLVAPLRFVRDFIRWRKTARRLGGRRVRLAAITVWVMPLTLGAVFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH LFGAANPVIDYWLSLIDLLKLLDLIQLARIAFWLFALAGVWAFLRPRLPRFSRRISRPPL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC AAARPAIHAQRHVIEDIVFGKAAILRALIVFNVLFALQTGLDATYLWGGVALPDGLSYAA HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCCCCCHHH YAHRGAYPLIVTALLAAGFVLAALRPGNETSKDPLIRRLVYAWVAQNIMLVISSILRLDL HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YVGIYALTYWRIAAFVWMGLVAAGLALIVARIALGKSNEWLSSANLLTLSLTLYACCFIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHH FAATIANYNVDHSLEMTGQGIPLDAWYLRSLGPGAFPALDRFFDRQGKTPDAGATRELVR HHHHHHCCCCCCCEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH LRGIDEGWYRTVQANWRAWSFRDWRLLGYLDSRGSLVLPQPSQPSLPGR HHCCCHHHHHHHCCCCCEECCCCEEEEEEECCCCCEECCCCCCCCCCCC >Mature Secondary Structure AAAVVAVHPTAFSDIRVWLKPAALLVALLPLAENVSPLSVSIALAALVVFALSLSGRLR CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH HGMACIAGQIALFLLVAPLRFVRDFIRWRKTARRLGGRRVRLAAITVWVMPLTLGAVFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHH LFGAANPVIDYWLSLIDLLKLLDLIQLARIAFWLFALAGVWAFLRPRLPRFSRRISRPPL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC AAARPAIHAQRHVIEDIVFGKAAILRALIVFNVLFALQTGLDATYLWGGVALPDGLSYAA HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCCCCCHHH YAHRGAYPLIVTALLAAGFVLAALRPGNETSKDPLIRRLVYAWVAQNIMLVISSILRLDL HHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YVGIYALTYWRIAAFVWMGLVAAGLALIVARIALGKSNEWLSSANLLTLSLTLYACCFIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHH FAATIANYNVDHSLEMTGQGIPLDAWYLRSLGPGAFPALDRFFDRQGKTPDAGATRELVR HHHHHHCCCCCCCEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH LRGIDEGWYRTVQANWRAWSFRDWRLLGYLDSRGSLVLPQPSQPSLPGR HHCCCHHHHHHHCCCCCEECCCCEEEEEEECCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA