| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473713
Identifier: 13473713
GI number: 13473713
Start: 3493217
End: 3493891
Strand: Direct
Name: 13473713
Synonym: mlr4404
Alternate gene names: NA
Gene position: 3493217-3493891 (Clockwise)
Preceding gene: 13473712
Following gene: 13473716
Centisome position: 49.65
GC content: 61.19
Gene sequence:
>675_bases ATGAGCGATCCTATTCCGCCCGTTGTGACGGCGATGGCGGCCGGGGCGCAATCGTTGAGGGATACCGCCAAATGGCTGGT CGGTGGGGTGGTGGCGACCGCGGCGGCGGTCTTTGCCGGCAGCTCCCTGACATCGTTTGGAGCGCTTGATCCGACGGCAG ACGGGCACAGGATGGTGCTGGCCGTCGGAGGTCTTGCCGCGGGATTTGTCGGCCTCTGCGTCGTCATGGTGCCGGCACTT CGGGTTCTGGTCGTCGAGGCCAGAACGTTTCGCGATTTCGCCACCACCATGGATGCGGAAATCCAAGCGGTGCGGAATCG TCTGGTTCCGCGCTACCAGAAGGAGTTTCCGCCGACTGTGGATTCCTTCGAAGGCTATCAGGACGTTGTTGATGACGCGC TGGCGCGAATAAAAGCGGGCGGAAGAGATCAAAACGACGCGACCTTGATCGCCGATAAGGCGTTGGTCGCCAAGGCTCAA AACGACTTCGCGACAATCAACGCCGACGCCGGGTTCAATGTCGTGCGCGACCGGGTGACGAAGCTTTGGTACGGGCTGGC GATCGGCACGATAATTGCGATCCTCGGCTTTGGCCTGTTCGCGTGGGCTGCAAATCCCGGCGCGCCAAAATCCCCACCTC CGGCTTTCTCGCTGACCATTCAGGGCAAACAATAA
Upstream 100 bases:
>100_bases CTGACCTTCATGAGGTCAGTAGATTGAAACAGCAGATCGCAAAGGAGATGAGGGATCTTCCCCTGGCGATCGATTTCGGC GATCTGGGATACTTGGAGAA
Downstream 100 bases:
>100_bases CGTCGGATTTGCGCTAGTTCCCCGACCCCTGCGCGTCGTCGAGCGCCTTCTTGATGTCCTCCGGCCAGTCCTTCAGCGGC GGCCAGGCTGCTGGCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSDPIPPVVTAMAAGAQSLRDTAKWLVGGVVATAAAVFAGSSLTSFGALDPTADGHRMVLAVGGLAAGFVGLCVVMVPAL RVLVVEARTFRDFATTMDAEIQAVRNRLVPRYQKEFPPTVDSFEGYQDVVDDALARIKAGGRDQNDATLIADKALVAKAQ NDFATINADAGFNVVRDRVTKLWYGLAIGTIIAILGFGLFAWAANPGAPKSPPPAFSLTIQGKQ
Sequences:
>Translated_224_residues MSDPIPPVVTAMAAGAQSLRDTAKWLVGGVVATAAAVFAGSSLTSFGALDPTADGHRMVLAVGGLAAGFVGLCVVMVPAL RVLVVEARTFRDFATTMDAEIQAVRNRLVPRYQKEFPPTVDSFEGYQDVVDDALARIKAGGRDQNDATLIADKALVAKAQ NDFATINADAGFNVVRDRVTKLWYGLAIGTIIAILGFGLFAWAANPGAPKSPPPAFSLTIQGKQ >Mature_223_residues SDPIPPVVTAMAAGAQSLRDTAKWLVGGVVATAAAVFAGSSLTSFGALDPTADGHRMVLAVGGLAAGFVGLCVVMVPALR VLVVEARTFRDFATTMDAEIQAVRNRLVPRYQKEFPPTVDSFEGYQDVVDDALARIKAGGRDQNDATLIADKALVAKAQN DFATINADAGFNVVRDRVTKLWYGLAIGTIIAILGFGLFAWAANPGAPKSPPPAFSLTIQGKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23460; Mature: 23329
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPIPPVVTAMAAGAQSLRDTAKWLVGGVVATAAAVFAGSSLTSFGALDPTADGHRMVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEE AVGGLAAGFVGLCVVMVPALRVLVVEARTFRDFATTMDAEIQAVRNRLVPRYQKEFPPTV ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCC DSFEGYQDVVDDALARIKAGGRDQNDATLIADKALVAKAQNDFATINADAGFNVVRDRVT CCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH KLWYGLAIGTIIAILGFGLFAWAANPGAPKSPPPAFSLTIQGKQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure SDPIPPVVTAMAAGAQSLRDTAKWLVGGVVATAAAVFAGSSLTSFGALDPTADGHRMVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEEE AVGGLAAGFVGLCVVMVPALRVLVVEARTFRDFATTMDAEIQAVRNRLVPRYQKEFPPTV ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCC DSFEGYQDVVDDALARIKAGGRDQNDATLIADKALVAKAQNDFATINADAGFNVVRDRVT CCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH KLWYGLAIGTIIAILGFGLFAWAANPGAPKSPPPAFSLTIQGKQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA