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The map label for this gene is ycdK [C]

Identifier: 13473711

GI number: 13473711

Start: 3492177

End: 3492569

Strand: Reverse

Name: ycdK [C]

Synonym: mll4402

Alternate gene names: 13473711

Gene position: 3492569-3492177 (Counterclockwise)

Preceding gene: 13473714

Following gene: 13473710

Centisome position: 49.64

GC content: 63.87

Gene sequence:

>393_bases
ATGCGCAAACTGATCTCCACCGGTTCGCCCTTCGAGAAGACCGCCGGCTATTCGCGCGCGGTGGTGCAGGGCGACTGGTG
TTTCGTGTCCGGGACGACCGGCTATGACTACGCCACGATGACGATGCCGGAAACGGTCGAGGCGCAGACGCGCAACTGCC
TGGCGACGATCGGCAAGGCGCTGGCCGATGGCGGCTTCGAGGTGGCCGATGTGGTGCGGGCGCATTACTACATCACCGAC
CAGGCCTTTGTGGACGTGGTCTTCCCGATCCTGGGCGAGACATTCGGCGACATCAGGCCGGCGGCGACGATGATCGTGTG
CCAGCTCAACAAGCCGGAAATGAAGATCGAGATCGAAGTCACGGCGCTGCGGCGCTCAGCTCAGGGGCGTTGA

Upstream 100 bases:

>100_bases
GGTAAGTTTCTTTCCCAGCAGGACAACAACCAATTTTCCCTGGCATATAGCCAGGCAACCAGCTGTCCGACAGATTGCTG
CAACAACCGCGAGGCCGCCC

Downstream 100 bases:

>100_bases
GACCATGAAGGTCCGGCGCATCGTGGCCAATATCGAGACGCAGGATGTGGCGGCGGCGAAACGCTTCTACCAGGACGTGC
TTGGCCTAGACGTGCTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family Protein; Endoribonuclease; Pyrimidine Utilization Protein C; Translation Initiation Inhibitor; Acetyltransferase; Endoribonuclease L-PSP Family; Aldo/Keto Reductase Family Protein; Oxidoreductase Aldo/Keto Reductase Family; YjgF-Family Protein; Translation Initiation Inhibitor-Related Protein; Endoribonuclease L-PSP YjgF-Like; Endoribonuclease L-Psp; Ribonuclease PSP-Type; Endoribonuclease L-PSP Superfamily; YigF Family Translation Initiation Factor

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRKLISTGSPFEKTAGYSRAVVQGDWCFVSGTTGYDYATMTMPETVEAQTRNCLATIGKALADGGFEVADVVRAHYYITD
QAFVDVVFPILGETFGDIRPAATMIVCQLNKPEMKIEIEVTALRRSAQGR

Sequences:

>Translated_130_residues
MRKLISTGSPFEKTAGYSRAVVQGDWCFVSGTTGYDYATMTMPETVEAQTRNCLATIGKALADGGFEVADVVRAHYYITD
QAFVDVVFPILGETFGDIRPAATMIVCQLNKPEMKIEIEVTALRRSAQGR
>Mature_130_residues
MRKLISTGSPFEKTAGYSRAVVQGDWCFVSGTTGYDYATMTMPETVEAQTRNCLATIGKALADGGFEVADVVRAHYYITD
QAFVDVVFPILGETFGDIRPAATMIVCQLNKPEMKIEIEVTALRRSAQGR

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14235; Mature: 14235

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLISTGSPFEKTAGYSRAVVQGDWCFVSGTTGYDYATMTMPETVEAQTRNCLATIGKA
CCCCCCCCCCHHHHCCCCEEEEECCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHH
LADGGFEVADVVRAHYYITDQAFVDVVFPILGETFGDIRPAATMIVCQLNKPEMKIEIEV
HCCCCCHHHHHHHHHEEECHHHHHHHHHHHHCCHHCCCCCCEEEEEEECCCCCEEEEEEE
TALRRSAQGR
EEECCCCCCC
>Mature Secondary Structure
MRKLISTGSPFEKTAGYSRAVVQGDWCFVSGTTGYDYATMTMPETVEAQTRNCLATIGKA
CCCCCCCCCCHHHHCCCCEEEEECCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHH
LADGGFEVADVVRAHYYITDQAFVDVVFPILGETFGDIRPAATMIVCQLNKPEMKIEIEV
HCCCCCHHHHHHHHHEEECHHHHHHHHHHHHCCHHCCCCCCEEEEEEECCCCCEEEEEEE
TALRRSAQGR
EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA