| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473691
Identifier: 13473691
GI number: 13473691
Start: 3473937
End: 3474863
Strand: Direct
Name: 13473691
Synonym: mlr4376
Alternate gene names: NA
Gene position: 3473937-3474863 (Clockwise)
Preceding gene: 13473690
Following gene: 13473692
Centisome position: 49.37
GC content: 65.37
Gene sequence:
>927_bases ATGGCCGAACCGGGACATGGGTTTTGCCGCGCCTGCGCGCTGAATCAGCTGATCCCCGATCTCTCCGTCGACGGCAACCG CCGCCGCTGGATCCGGGTCGAGGCGGCCAAGAAGCGCGCCATCTATTCGCTGCTCGCCTTCGGCCTGCCGGTGGCGCCCA AGCAGGCGCCCGCGGACGAGGTGGGTCTCGCCTTCGACTTCCTCGCCGATCCGATCGGCGGCGGGCCGGGCGGCGAACGC ATCCTCACCGGCCATGACAATGGCCTGATCACGCTCAACGTCGCCGAGGCCGATTCGGCCGAGCGCGAGAAGCGCCGCGT CGAGATGGGCGAGAATTACCGGACGCTGCTCGGCCATTTCCGCCACGAACTCGGCCACTATTACTGGGATCGCCTGATCC GCGACGATGCGCAACGGCTGGACGCTTTCCGCGCTCTGTTCGGCGACGACCGCGCCGATTACGAACAGGCGCTGACGGCT TACTACGCCAACGGTGCCGCGCCCGACTGGCAGCAAAACCACATCTCGGCCTACGCCACCTCGCATCCCTGGGAGGACTG GGCCGAGACCTGGGCCCACCATCTGCACATCACCGACACGCTGGAGATGGTCCACGCGCTGAATTTCCCGCTCGGCCGGC TGGAGACGGTGGAAGCCAATGATTTGCCGCGCGGCGACACCGGCGGCGAACTGCAGGCGGCCCCTTCGGAGCCTGCCAAC ACTCCCGAGCCCTTCGAAAGGATCCTTACCCGCTGGCTGGTGCTGTCGGAAGCCTCCAATTCGATCAACCGCTGCATGGG TCTGCCCGACCTCTATCCCTTCGTCATTTCAGATGTGACGGCGCGAAAACTGGCCTTCGTTCACGAGCTTTTGACCGGAC TGCCGAAAGACGCGGGAACAAATCGTGAGTTGGCGCGGGCGTTTTAG
Upstream 100 bases:
>100_bases CAGCCTCGTGCTCTACGATCCCGAACACGCCCGCTTCGCCCTGTCGGGCGCCGACGGCATCTTCCAGTGCACCAATGCCG ATGAATGCGCCTGCAACTGG
Downstream 100 bases:
>100_bases CCGGAACGCATGCGCTGCTGCCCCGTTTTCACGCCGAGGGACCAATGAAAACGGAGTGAGACCATGAAATCCGTCTTGTT GCCCGCAATCGCCGGGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MAEPGHGFCRACALNQLIPDLSVDGNRRRWIRVEAAKKRAIYSLLAFGLPVAPKQAPADEVGLAFDFLADPIGGGPGGER ILTGHDNGLITLNVAEADSAEREKRRVEMGENYRTLLGHFRHELGHYYWDRLIRDDAQRLDAFRALFGDDRADYEQALTA YYANGAAPDWQQNHISAYATSHPWEDWAETWAHHLHITDTLEMVHALNFPLGRLETVEANDLPRGDTGGELQAAPSEPAN TPEPFERILTRWLVLSEASNSINRCMGLPDLYPFVISDVTARKLAFVHELLTGLPKDAGTNRELARAF
Sequences:
>Translated_308_residues MAEPGHGFCRACALNQLIPDLSVDGNRRRWIRVEAAKKRAIYSLLAFGLPVAPKQAPADEVGLAFDFLADPIGGGPGGER ILTGHDNGLITLNVAEADSAEREKRRVEMGENYRTLLGHFRHELGHYYWDRLIRDDAQRLDAFRALFGDDRADYEQALTA YYANGAAPDWQQNHISAYATSHPWEDWAETWAHHLHITDTLEMVHALNFPLGRLETVEANDLPRGDTGGELQAAPSEPAN TPEPFERILTRWLVLSEASNSINRCMGLPDLYPFVISDVTARKLAFVHELLTGLPKDAGTNRELARAF >Mature_307_residues AEPGHGFCRACALNQLIPDLSVDGNRRRWIRVEAAKKRAIYSLLAFGLPVAPKQAPADEVGLAFDFLADPIGGGPGGERI LTGHDNGLITLNVAEADSAEREKRRVEMGENYRTLLGHFRHELGHYYWDRLIRDDAQRLDAFRALFGDDRADYEQALTAY YANGAAPDWQQNHISAYATSHPWEDWAETWAHHLHITDTLEMVHALNFPLGRLETVEANDLPRGDTGGELQAAPSEPANT PEPFERILTRWLVLSEASNSINRCMGLPDLYPFVISDVTARKLAFVHELLTGLPKDAGTNRELARAF
Specific function: Unknown
COG id: COG4307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011201 [H]
Pfam domain/function: PF10005 DUF2248 [H]
EC number: NA
Molecular weight: Translated: 34377; Mature: 34246
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPGHGFCRACALNQLIPDLSVDGNRRRWIRVEAAKKRAIYSLLAFGLPVAPKQAPADE CCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHH VGLAFDFLADPIGGGPGGERILTGHDNGLITLNVAEADSAEREKRRVEMGENYRTLLGHF HHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHH RHELGHYYWDRLIRDDAQRLDAFRALFGDDRADYEQALTAYYANGAAPDWQQNHISAYAT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHCHHHHCC SHPWEDWAETWAHHLHITDTLEMVHALNFPLGRLETVEANDLPRGDTGGELQAAPSEPAN CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC TPEPFERILTRWLVLSEASNSINRCMGLPDLYPFVISDVTARKLAFVHELLTGLPKDAGT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NRELARAF CHHHHHCC >Mature Secondary Structure AEPGHGFCRACALNQLIPDLSVDGNRRRWIRVEAAKKRAIYSLLAFGLPVAPKQAPADE CCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHH VGLAFDFLADPIGGGPGGERILTGHDNGLITLNVAEADSAEREKRRVEMGENYRTLLGHF HHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHH RHELGHYYWDRLIRDDAQRLDAFRALFGDDRADYEQALTAYYANGAAPDWQQNHISAYAT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHCHHHHCC SHPWEDWAETWAHHLHITDTLEMVHALNFPLGRLETVEANDLPRGDTGGELQAAPSEPAN CCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC TPEPFERILTRWLVLSEASNSINRCMGLPDLYPFVISDVTARKLAFVHELLTGLPKDAGT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NRELARAF CHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]