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The map label for this gene is cycY [H]

Identifier: 13473659

GI number: 13473659

Start: 3444571

End: 3445149

Strand: Reverse

Name: cycY [H]

Synonym: mll4330

Alternate gene names: 13473659

Gene position: 3445149-3444571 (Counterclockwise)

Preceding gene: 13473660

Following gene: 13473657

Centisome position: 48.96

GC content: 65.11

Gene sequence:

>579_bases
GTGAGCGGCGAGACCGAAACACCGACGCGCGGTCGCCGCCTGTTCGTCCTGTTGCCGCTGCTGGTTTTTCTCGGCCTGGC
GGGCTTGTTCCTGTGGCAGCTGTTATCGGGACGCGATGTCTCGGAAGTGCCATCGGCGCTAATCGGCCTGCCGGCGCCGC
AGACCAATCTGCCGGCACTGGAGGGATCAAATCTGCCGGGGCTTGATTCCAGGGCGTTCGCCGGCAAGGTCACGCTGGTC
AACGTGTTCGCATCATGGTGCGCGCCGTGCCGCGAAGAGCACCCGGTGCTTCTGGCGCTGGCGCAGGACAAGCGGTTCAC
GATGGCGGCGCTGAACTATAAGGACCAGCCGGAAAACGCCCGCCGGTTCCTCGGCGACCTCGGCAATCCGTTCCAGGCCA
TCGGGGTCGACGAAGCCGGCCGCACGGCAATCGACTGGGGTGTCTACGGCGTGCCGGAAACCTTCGTCATCGGCAAGGAC
GGCAAAATTGCCTACAAGCATGTCGGCCCGCTGACGGCGGAAGCGGCGCGGGATGTGTTGCTGCCGCAAATCGACAAGGC
ACTGGCCGTGCCGAACTGA

Upstream 100 bases:

>100_bases
GCTGGATCCTGCTTGATCAAAAGGGGCGCAAGCGCGATCTTGCCGAGCTGGAAGCAGCCGGCGTGCGGCGGCGTTCCGAC
AAGGCGGAGGCGGAGAAATC

Downstream 100 bases:

>100_bases
CGGCGATCTCTTGCTTCGTCATTCTACGGCGAAGCGAAGCGACGCGGCGCAGACCCCTGGAGCTGCTCTGCAGCCCAAGG
AATCCATGCCGGGACGTTGG

Product: cytochrome c biogenesis protein CycX

Products: NA

Alternate protein names: Cytochrome c biogenesis protein CycY [H]

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSGETETPTRGRRLFVLLPLLVFLGLAGLFLWQLLSGRDVSEVPSALIGLPAPQTNLPALEGSNLPGLDSRAFAGKVTLV
NVFASWCAPCREEHPVLLALAQDKRFTMAALNYKDQPENARRFLGDLGNPFQAIGVDEAGRTAIDWGVYGVPETFVIGKD
GKIAYKHVGPLTAEAARDVLLPQIDKALAVPN

Sequences:

>Translated_192_residues
MSGETETPTRGRRLFVLLPLLVFLGLAGLFLWQLLSGRDVSEVPSALIGLPAPQTNLPALEGSNLPGLDSRAFAGKVTLV
NVFASWCAPCREEHPVLLALAQDKRFTMAALNYKDQPENARRFLGDLGNPFQAIGVDEAGRTAIDWGVYGVPETFVIGKD
GKIAYKHVGPLTAEAARDVLLPQIDKALAVPN
>Mature_191_residues
SGETETPTRGRRLFVLLPLLVFLGLAGLFLWQLLSGRDVSEVPSALIGLPAPQTNLPALEGSNLPGLDSRAFAGKVTLVN
VFASWCAPCREEHPVLLALAQDKRFTMAALNYKDQPENARRFLGDLGNPFQAIGVDEAGRTAIDWGVYGVPETFVIGKDG
KIAYKHVGPLTAEAARDVLLPQIDKALAVPN

Specific function: Required for disulfide bond formation in some periplasmic proteins. Also act as a disulfide oxidoreductase in cytochromes c biogenesis. The cysteines of apocytochromes c must be in the reduced state for covalent linkage between the two moieties to occur [

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788523, Length=181, Percent_Identity=38.121546961326, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004799
- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 20660; Mature: 20529

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGETETPTRGRRLFVLLPLLVFLGLAGLFLWQLLSGRDVSEVPSALIGLPAPQTNLPAL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
EGSNLPGLDSRAFAGKVTLVNVFASWCAPCREEHPVLLALAQDKRFTMAALNYKDQPENA
CCCCCCCCCCCHHHCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCHHH
RRFLGDLGNPFQAIGVDEAGRTAIDWGVYGVPETFVIGKDGKIAYKHVGPLTAEAARDVL
HHHHHHCCCCCEEECCCCCCCEEECCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHH
LPQIDKALAVPN
HHHHHHHHCCCC
>Mature Secondary Structure 
SGETETPTRGRRLFVLLPLLVFLGLAGLFLWQLLSGRDVSEVPSALIGLPAPQTNLPAL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
EGSNLPGLDSRAFAGKVTLVNVFASWCAPCREEHPVLLALAQDKRFTMAALNYKDQPENA
CCCCCCCCCCCHHHCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCCHHH
RRFLGDLGNPFQAIGVDEAGRTAIDWGVYGVPETFVIGKDGKIAYKHVGPLTAEAARDVL
HHHHHHCCCCCEEECCCCCCCEEECCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHH
LPQIDKALAVPN
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1850420; 12597275 [H]