| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473623
Identifier: 13473623
GI number: 13473623
Start: 3413258
End: 3413482
Strand: Direct
Name: 13473623
Synonym: msr4285
Alternate gene names: NA
Gene position: 3413258-3413482 (Clockwise)
Preceding gene: 13473616
Following gene: 13473624
Centisome position: 48.51
GC content: 56.44
Gene sequence:
>225_bases ATGTCCTTTGCCTCCGAGACATTCGTCTGCAAGACATCGGACAGGGGCGACTACACCGTCATTGTTGACGGGTCCGGCAG ATTCTTCTTCCGGTTCGGCGGCGACATACAGCTATTTCAGCGCTTTGTCACGCCCGCGCACGAGTCTTTTTTGCCGGCAT GGCATCATCGTAATCGCTTCGTGCCGGGTTGCGCCGCTCTCTGGGGCTTTCTAAGCCTGATGTAA
Upstream 100 bases:
>100_bases TCGAGCTGACGGATGATATCCATCTCAATAATCCACTTCTTGTTCTTCCGACAGTCAGAGCGTCCGACACTCGCCTTGCA GTTCCATTGACCGCTCGGCT
Downstream 100 bases:
>100_bases CAGAGTTTTCCGCGGCGGCATCCCATGTCTGTCTTCGACGCCATCCTGCTCTTCCTGGCGGGCTTCCTGTCCGGTGCCGC CAATGCTGTCGCCGGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSFASETFVCKTSDRGDYTVIVDGSGRFFFRFGGDIQLFQRFVTPAHESFLPAWHHRNRFVPGCAALWGFLSLM
Sequences:
>Translated_74_residues MSFASETFVCKTSDRGDYTVIVDGSGRFFFRFGGDIQLFQRFVTPAHESFLPAWHHRNRFVPGCAALWGFLSLM >Mature_73_residues SFASETFVCKTSDRGDYTVIVDGSGRFFFRFGGDIQLFQRFVTPAHESFLPAWHHRNRFVPGCAALWGFLSLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8468; Mature: 8337
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFASETFVCKTSDRGDYTVIVDGSGRFFFRFGGDIQLFQRFVTPAHESFLPAWHHRNRF CCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC VPGCAALWGFLSLM CCHHHHHHHHHHCC >Mature Secondary Structure SFASETFVCKTSDRGDYTVIVDGSGRFFFRFGGDIQLFQRFVTPAHESFLPAWHHRNRF CCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC VPGCAALWGFLSLM CCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA