| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473586
Identifier: 13473586
GI number: 13473586
Start: 3379644
End: 3379892
Strand: Direct
Name: 13473586
Synonym: msr4233
Alternate gene names: NA
Gene position: 3379644-3379892 (Clockwise)
Preceding gene: 13473583
Following gene: 13473588
Centisome position: 48.03
GC content: 66.27
Gene sequence:
>249_bases ATGACCGACATTGCTCTGAAGTCCCATACCGCCCTCAAATCCCACACCGGCATCGCATTCTGGCTGCGCGCCGCGATCGA CTGGCTGCGCCAGGCGCGGGTCGCCATCCGGCTTCCGCACGAATCCGTCGAGGGCCTTTCCGACAGCCAGCTGCGTGACA TCGGCGCCGAGCGCCGGGATGTCGCGCAGGCGATGGACCGGGAACTCCGCGAAATCGGACTGCTGGGCACGGGTTGGCAG AAGCGATAG
Upstream 100 bases:
>100_bases AAAGAACTACTCGTTTCCCGTTTGTTTTTCAATCCGGCATGATCTCGACATCGAGATACCTTCAAACCGGATTTGAAATC CGGAGAAACCGGATAAAGCC
Downstream 100 bases:
>100_bases AAGTAAGGGAATTGGCAGTAGGGAATAGGCTTAGAAAGAGATGCCCTACTGCCTACTGCCCTATCTCACCACCCTCACCA CCGTCCGATCCGACAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTDIALKSHTALKSHTGIAFWLRAAIDWLRQARVAIRLPHESVEGLSDSQLRDIGAERRDVAQAMDRELREIGLLGTGWQ KR
Sequences:
>Translated_82_residues MTDIALKSHTALKSHTGIAFWLRAAIDWLRQARVAIRLPHESVEGLSDSQLRDIGAERRDVAQAMDRELREIGLLGTGWQ KR >Mature_81_residues TDIALKSHTALKSHTGIAFWLRAAIDWLRQARVAIRLPHESVEGLSDSQLRDIGAERRDVAQAMDRELREIGLLGTGWQK R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9291; Mature: 9160
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIALKSHTALKSHTGIAFWLRAAIDWLRQARVAIRLPHESVEGLSDSQLRDIGAERRD CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHCCCHHHH VAQAMDRELREIGLLGTGWQKR HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TDIALKSHTALKSHTGIAFWLRAAIDWLRQARVAIRLPHESVEGLSDSQLRDIGAERRD CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHCCCHHHH VAQAMDRELREIGLLGTGWQKR HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA