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The map label for this gene is yciI [H]

Identifier: 13473580

GI number: 13473580

Start: 3376584

End: 3376880

Strand: Direct

Name: yciI [H]

Synonym: msr4226

Alternate gene names: 13473580

Gene position: 3376584-3376880 (Clockwise)

Preceding gene: 13473579

Following gene: 13473581

Centisome position: 47.99

GC content: 61.95

Gene sequence:

>297_bases
ATGCTGTTTGCTTTTGTTTGCAAGGACAAGCCGGGAAGCCTGCAGGTGCGCCTCGACACGCGGCCCGAGCATGTCGCCTT
TCTCGAAGGGCTGAATGCGGACAAGAAACTGGCCTTCGCCGGTCCGTTCCTCGATGCCGATGGCAAGCCCAATGGCAGTC
TCGTGGTCGTTGAGGCGCCGGATCTGGCCGCGGCGCAGGCCTTGTCGGCCGCCGACCCCTATGCCAAGGCGGGCCTGTTC
GAAAGCGTCGAAATTCGCCAGTGGAACTGGACGTTCAACAAGCCGGCGGCTAGTTAA

Upstream 100 bases:

>100_bases
CGTGACCGCCTTGATGACCCGGCCGCTGAAGACCGAAACCAACGATTGATCCCCCAACTTCAACCCCCCAACTTCAATCC
CAACGACCAGGAGAAAGACC

Downstream 100 bases:

>100_bases
TTCCGGTTGCCCGCACCTGGATCGCACGGAGGAGAAACATGAACTACTGGCTGTTCAAATCCGAACCCTCGGTTTTCTCC
TTCGAGGCGTTGAAGGCCAA

Product: YciI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MLFAFVCKDKPGSLQVRLDTRPEHVAFLEGLNADKKLAFAGPFLDADGKPNGSLVVVEAPDLAAAQALSAADPYAKAGLF
ESVEIRQWNWTFNKPAAS

Sequences:

>Translated_98_residues
MLFAFVCKDKPGSLQVRLDTRPEHVAFLEGLNADKKLAFAGPFLDADGKPNGSLVVVEAPDLAAAQALSAADPYAKAGLF
ESVEIRQWNWTFNKPAAS
>Mature_98_residues
MLFAFVCKDKPGSLQVRLDTRPEHVAFLEGLNADKKLAFAGPFLDADGKPNGSLVVVEAPDLAAAQALSAADPYAKAGLF
ESVEIRQWNWTFNKPAAS

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yciI family [H]

Homologues:

Organism=Escherichia coli, GI87081861, Length=98, Percent_Identity=37.7551020408163, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR005545 [H]

Pfam domain/function: PF03795 YCII [H]

EC number: NA

Molecular weight: Translated: 10533; Mature: 10533

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFAFVCKDKPGSLQVRLDTRPEHVAFLEGLNADKKLAFAGPFLDADGKPNGSLVVVEAP
CEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCEEEEECCEECCCCCCCCCEEEEECC
DLAAAQALSAADPYAKAGLFESVEIRQWNWTFNKPAAS
CCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MLFAFVCKDKPGSLQVRLDTRPEHVAFLEGLNADKKLAFAGPFLDADGKPNGSLVVVEAP
CEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCEEEEECCEECCCCCCCCCEEEEECC
DLAAAQALSAADPYAKAGLFESVEIRQWNWTFNKPAAS
CCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]