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The map label for this gene is yufP [H]

Identifier: 13473536

GI number: 13473536

Start: 3330528

End: 3331583

Strand: Reverse

Name: yufP [H]

Synonym: mll4175

Alternate gene names: 13473536

Gene position: 3331583-3330528 (Counterclockwise)

Preceding gene: 13473537

Following gene: 13473535

Centisome position: 47.35

GC content: 67.61

Gene sequence:

>1056_bases
ATGTTTCGCCTGGAAGTCCGCACCTCGACGCCGACCTGGTTCAATCTCGCGCTCCCGTTGGTGGCGATCGCGGCGACGCT
TGTCCTGTGCAGCGGCCTGATCGCACTAGCCGGCGCCGGCGTTCTGGAATCCTACGGCGTGATGTTCACCGCCTCGCTCG
GCGACAGCTACGCAATCACCGAAACGCTGGTGCGCGCGGCACCGATGATCTTCACCGGGCTGGCGGTCGCCGTCGCCTTC
CGCGCCAAATTCTGGAACATCGGTGCCGAGGGCCAGTTGCTGGCCGGTGCGGTCGCCAGCTGCTTTGTCGGCGCGATCCC
GATGCCGGGGCCGCTCGCCATGCTGCTGATGGCAATCGCCGGCGCCGCCGCCGGCGCAGTGGTCGCGCTGGTGCCCGCGA
CGCTGCGGGTCAAATTCAAGGTCGACGATGTCGTCAGCTCGCTGCTGCTCAACTCGGTCATCTACTACGCGCTGATGGCG
CTGATCGAAGGGCCATGGAAGGACAGCTTCAGCGGCTATCCGATCTCGCCGCCAATCGAGGATTCGGCCAATTTCCCGGT
GCTGATCGAAGGCACGCGGCTGCATCTGGGCGTCATCGTGGCGCTGATCGCCGCGCCGCTGATCTGGTTCCTCATCGCGC
GCACGACGCTTGGCTTCCGCATCAGGGTCACCGGCGAGAGCCCGGAAGCCGCCCGCTATGGCGGTATCCACGTCGAGCGG
GTGCTGCTCTCGACCGCGCTCATGTCCGGCGCGCTGGCCGGGCTCGCCGGCGTCGGTGAAGTCGGCGGCGTGCATTTCCA
GGTGATGAGCGACATCTCGCCTGGCTACGGCTATTCAGGCATCGTCGTCGCCATGCTGGCGCGGCTCAATCCGCTGGGCG
TGGTGCCGGCGGCGATCTTCCTCGCCGCCGTGATGACCGGCGCCGAGGCGATGTCGCGCGCGACCGGCGTGCCGGCCTTC
CTCAGCGACGTCATCCAGGGGACCGCCTTGCTCGCCATGCTGGTGGCGCTGCTGTTCACCGCCTATCGCATTCGCCGCGT
CGGAGCCGCCTCATGA

Upstream 100 bases:

>100_bases
CGGTGATGTATGAGGGCCGCATTGTCGGCACGCTCGACAGTGCTGATGCGACGGTCGCGCGGCTCGGCCTGCTGATGACC
GGGGCGGAGGGTCACAGCTG

Downstream 100 bases:

>100_bases
GCGCGGTGTTCGAACAGATCTTCCAGGTCGGCTTCCTGGCCGCCATCATCCGCATCGCCACGCCGCTGGCCTTCGCCACG
CTCGGCGAGATGTTCTCCGA

Product: sugar ABC transporter, permease protein, rbsC-1

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MFRLEVRTSTPTWFNLALPLVAIAATLVLCSGLIALAGAGVLESYGVMFTASLGDSYAITETLVRAAPMIFTGLAVAVAF
RAKFWNIGAEGQLLAGAVASCFVGAIPMPGPLAMLLMAIAGAAAGAVVALVPATLRVKFKVDDVVSSLLLNSVIYYALMA
LIEGPWKDSFSGYPISPPIEDSANFPVLIEGTRLHLGVIVALIAAPLIWFLIARTTLGFRIRVTGESPEAARYGGIHVER
VLLSTALMSGALAGLAGVGEVGGVHFQVMSDISPGYGYSGIVVAMLARLNPLGVVPAAIFLAAVMTGAEAMSRATGVPAF
LSDVIQGTALLAMLVALLFTAYRIRRVGAAS

Sequences:

>Translated_351_residues
MFRLEVRTSTPTWFNLALPLVAIAATLVLCSGLIALAGAGVLESYGVMFTASLGDSYAITETLVRAAPMIFTGLAVAVAF
RAKFWNIGAEGQLLAGAVASCFVGAIPMPGPLAMLLMAIAGAAAGAVVALVPATLRVKFKVDDVVSSLLLNSVIYYALMA
LIEGPWKDSFSGYPISPPIEDSANFPVLIEGTRLHLGVIVALIAAPLIWFLIARTTLGFRIRVTGESPEAARYGGIHVER
VLLSTALMSGALAGLAGVGEVGGVHFQVMSDISPGYGYSGIVVAMLARLNPLGVVPAAIFLAAVMTGAEAMSRATGVPAF
LSDVIQGTALLAMLVALLFTAYRIRRVGAAS
>Mature_351_residues
MFRLEVRTSTPTWFNLALPLVAIAATLVLCSGLIALAGAGVLESYGVMFTASLGDSYAITETLVRAAPMIFTGLAVAVAF
RAKFWNIGAEGQLLAGAVASCFVGAIPMPGPLAMLLMAIAGAAAGAVVALVPATLRVKFKVDDVVSSLLLNSVIYYALMA
LIEGPWKDSFSGYPISPPIEDSANFPVLIEGTRLHLGVIVALIAAPLIWFLIARTTLGFRIRVTGESPEAARYGGIHVER
VLLSTALMSGALAGLAGVGEVGGVHFQVMSDISPGYGYSGIVVAMLARLNPLGVVPAAIFLAAVMTGAEAMSRATGVPAF
LSDVIQGTALLAMLVALLFTAYRIRRVGAAS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36311; Mature: 36311

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLEVRTSTPTWFNLALPLVAIAATLVLCSGLIALAGAGVLESYGVMFTASLGDSYAIT
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCHHHH
ETLVRAAPMIFTGLAVAVAFRAKFWNIGAEGQLLAGAVASCFVGAIPMPGPLAMLLMAIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GAAAGAVVALVPATLRVKFKVDDVVSSLLLNSVIYYALMALIEGPWKDSFSGYPISPPIE
HHHHHHHHHEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
DSANFPVLIEGTRLHLGVIVALIAAPLIWFLIARTTLGFRIRVTGESPEAARYGGIHVER
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCHHHHH
VLLSTALMSGALAGLAGVGEVGGVHFQVMSDISPGYGYSGIVVAMLARLNPLGVVPAAIF
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
LAAVMTGAEAMSRATGVPAFLSDVIQGTALLAMLVALLFTAYRIRRVGAAS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFRLEVRTSTPTWFNLALPLVAIAATLVLCSGLIALAGAGVLESYGVMFTASLGDSYAIT
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEECCCCCHHHH
ETLVRAAPMIFTGLAVAVAFRAKFWNIGAEGQLLAGAVASCFVGAIPMPGPLAMLLMAIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GAAAGAVVALVPATLRVKFKVDDVVSSLLLNSVIYYALMALIEGPWKDSFSGYPISPPIE
HHHHHHHHHEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
DSANFPVLIEGTRLHLGVIVALIAAPLIWFLIARTTLGFRIRVTGESPEAARYGGIHVER
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCHHHHH
VLLSTALMSGALAGLAGVGEVGGVHFQVMSDISPGYGYSGIVVAMLARLNPLGVVPAAIF
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
LAAVMTGAEAMSRATGVPAFLSDVIQGTALLAMLVALLFTAYRIRRVGAAS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]